Publikationen

Esser N, Speiser E.

Raman Scattering at Surfaces

Springer, Bd. 45B, 2017

Reihe: Physics of Solid Surfaces

Type: Buchbeitrag

ISBN: 978-3-662-53906-4

Rosowski K, Ahrens M, Bracht T, Eisenacher M, Weber F, Hoffmann AC, Meyer H, Baba HA, Sitek B.

Tissue-based quantitative proteome analysis of human hepatocellular carcinoma using tandem mass tags

Biomarkers, Bd. 22, Nr. 2, 2017, S. 113–122

Type: Zeitschriftenbeitrag

DOI: dx.doi.org/10.1080/1354750X.2016.1210678

Mohammed Y, Bhowmick P, Smith DS, Domanski D, Jackson AM, Michaud SA, Malchow S, Percy AJ, Chambers AG, Palmer A, Zhang S, Sickmann A, Borchers CH.

PeptideTracker

A knowledge base for collecting and storing information on protein concentrations in biological tissues

Proteomics, Bd. 17, Nr. 7, 2016

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1002/pmic.201600210

Hofney Othman A, Meyer C, Telfah A, Lambert J, Hergenröder R, Dooley S, Hammad S.

Tamoxifen is critical as inducer of Cre activity in mouse models for hepatotoxicity studies

Zeitschrift für Gastroenterologie, Bd. 54, Nr. 12, 2016, S. 1343–1404

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1055/s-0036-1597371

Liebhaber M, Halbig B, Bass U, Geurts J, Neufeld S, Sanna S, Schmidt WG, Speiser E, Räthel J, Chandola S, Esser N.

Vibration eigenmodes of the Au-(5 x 2)/Si(111) surface studied by Raman spectroscopy and first-principles calculations

Physical Review B, Bd. 94, Nr. 23, 2016, S. 235304

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1103/PhysRevB.94.235304

Tinnefeld V, Venne S, Sickmann A, Zahedi RP.

Enrichment of Cross-Linked Peptides Using Charge-Based Fractional Diagonal Chromatography (ChaFRADIC)

Journal of Proteome Research, Bd. 16, Nr. 2, 2016, S. 459–469

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1021/acs.jproteome.6b00587

Gkogkou D, Shaykhutdinov T, Oates T, Gernert U, Schreiber B, Facsko S, Hildebrandt P, Weidinger IM, Esser N, Hinrichs K.

Characterization of anisotropically shaped silver nanoparticle arrays via spectroscopic ellipsometry supported by numerical optical modeling

Applied Surface Science, Bd. 421, 2016, S. 460–464

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.apsusc.2016.10.105

Zahedi RP.

Joining forces - studying multiple post-translational modifications to understand dynamic disease mechanisms

Expert Review of Proteomics, Bd. 13, Nr. 12, 2016, S. 1055–1057

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1080/14789450.2016.1231577

Pett C, Cai H, Liu J, Palitzsch B, Schorlemer M, Hartmann S, Stergiou N, Lu M, Kunz H, Schmitt E, Westerlind U.

Microarray Analysis of Antibodies Induced with Synthetic Antitumor Vaccines

Specificity against Diverse Mucin Core Structures

Chemistry-A European Journal, Bd. 23, Nr. 16, 2016, S. 3875–3884

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1002/chem.201603921

Pagel O, Walter E, Jurk K, Zahedi RP.

Taking the stock of granule cargo

Platelet releasate proteomics

Platelets, Bd. 28, Nr. 2, 2016, S. 119–128

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1080/09537104.2016.1254762

Gonczarowska-Jorge H, Zahedi RP, Sickmann A.

The proteome of baker's yeast mitochondria

Mitochondrion, Bd. 33, 2016, S. 15–21

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.mito.2016.08.007

Megger DA, Rosowski K, Ahrens M, Bracht T, Eisenacher M, Schlaak JF, Weber F, Hoffmann AC, Meyer H, Baba HA, Sitek B.

Tissue-based quantitative proteome analysis of human hepatocellular carcinoma using tandem mass tags

Biomarkers: Biochemical Indicators of Exposure, Response, and Susceptibility to Chemicals, Bd. 22, Nr. 2, 2016, S. 113–122

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1080/1354750X.2016.1210678

Gogiashvili M, Edlund K, Gianmoena K, Marchan R, Bryk O, Andersson JT, Lambert J, Madjar K, Hellwig B, Rahnenführer J, Hengstler JG, Hergenröder R, Cadenas C.

Metabolic profiling of ob/ob mouse fatty liver using HR-MAS H-1-NMR combined with gene expression analysis reveals alterations in betaine metabolism and the transsulfuration pathway

Analytical and Bioanalytical Chemistry, Bd. 409, Nr. 6, 2016, S. 1591–1606

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1007/s00216-016-0100-1

Verhelst SHL.

Intramembrane proteases as drug targets

The FEBS-Journal, Bd. 284, Nr. 10, 2016, S. 1489–1502

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1111/febs.13979

Fischer D, Hertwig A, Beck U, Negendank D, Lohse V, Kormunda M, Esser N.

Dependence of the optical constants and the performance in the SPREE gas measurement on the thickness of doped tin oxide over coatings

Applied Surface Science, Bd. 421, 2016, S. 480–486

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.apsusc.2016.11.188

Psatha K, Kollipara L, Voutyraki C, Divanach P, Sickmann A, Rassidakis GZ, Drakos E, Aivaliotis M.

Deciphering lymphoma pathogenesis via state-of-the-art mass spectrometry-based quantitative proteomics

Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences, Bd. 1047, 2016, S. 2–14

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.jchromb.2016.11.005

Alame S, Navarro-Quezada A, Skuridina D, Reich C, Henning D, Frentrup M, Wernicke T, Koslow I, Kneissl M, Esser N, Vogt P.

Preparation and structure of ultra-thin GaN (0001) layers on In0.11Ga0.89N-single quantum wells

Materials Science in Semiconductor Processing, Bd. 55, 2016, S. 7–11

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.mssp.2016.02.013

Petersen D, Mavarani L, Niedieker D, Freier E, Tannapfel A, Kötting C, Gerwert K, El-Mashtoly SF.

Virtual staining of colon cancer tissue by label-free Raman micro-spectroscopy

Analyst, Bd. 142, Nr. 8, 2016, S. 1207–1215

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1039/c6an02072k

Bartels MF, Winterhalter PR, Yu J, Liu Y, Lommel M, Möhrlen F, Hu H, Feizi T, Westerlind U, Ruppert T, Strahl S.

Protein O-Mannosylation in the Murine Brain

Occurrence of Mono-O-Mannosyl Glycans and Identification of New Substrates

PLOS One, Bd. 11, Nr. 11, 2016

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1371/journal.pone.0166119

Cuello F, Lorenz K.

Inhibition of cardiac CaMKII to cure heart failure: Step by step towards translation?

Cardioprotection by ivabradine through heart rate reduction and beyond.

Basic Research in Cardiology, Bd. 111, Nr. 66, 2016, S. 1–4

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1007/s00395-016-0582-1

Naboulsi W, Bracht T, Megger DA, Reis H, Ahrens M, Turewicz M, Eisenacher M, Tautges S, Canbay AE, Meyer H, Weber F, Baba HA, Sitek B.

Quantitative proteome analysis reveals the correlation between endocytosis-associated proteins and hepatocellular carcinoma dedifferentiation

Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics, Bd. 1864, Nr. 11, 2016, S. 1579–1585

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.bbapap.2016.08.005

Kratz C, Oates T, Hinrichs K.

Optimization and quantification of surface enhanced infrared absorption using gradient gold island films

Thin Solid Films, Bd. 617, Nr. A, 2016, S. 33–37

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.tsf.2016.02.019

Reifschneider O, Marx C, Jacobs J, Kollipara L, Sickmann A, Wolters D, Kück U.

A Ribonucleoprotein Supercomplex Involved in trans-Splicing of Organelle Group II Introns

Journal of Biological Chemistry, Bd. 291, Nr. 44, 2016, S. 23330–23342

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1074/jbc.M116.750570

Yang Y, Fonovic M, Verhelst SHL.

Cleavable linkers in chemical proteomics applications

Springer New York, Bd. 1491, 2016, S. 255–266

Reihe: Methods in molecular biology

Type: Buchbeitrag

DOI: /doi.org/10.1007/978-1-4939-6439-0_14

Xing Y, Esser N, Dittrich PS.

Conductive single nanowires formed and analysed on microfluidic devices

Journal of Materials Chemistry C, Bd. 4, Nr. 39, 2016, S. 9235–9244

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1039/C6TC02791A

Pietrowska M, Diehl HC, Mrukwa G, Kalinowska-Herok M, Gawin M, Chekan M, Elm J, Drazek G, Krawczyk A, Lange D, Meyer H, Polanska J, Henkel C, Widlak P.

Molecular profiles of thyroid cancer subtypes

Classification based on features of tissue revealed by mass spectrometry imaging

Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics, Bd. 1865, Nr. 7, 2016, S. 837–845

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.bbapap.2016.10.006

Roos A, Kollipara L, Buchkremer S, Labisch T, Brauers E, Gatz C, Lentz C, Gerardo-Nava J, Weis J, Zahedi RP.

Cellular Signature of SIL1 Depletion

Disease Pathogenesis due to Alterations in Protein Composition Beyond the ER Machinery

Molecular Neurobiology, Bd. 53, Nr. 8, 2016, S. 5527–5541

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1007/s12035-015-9456-z

Arsenjuk L, Kaske F, Franzke J, Agar DW.

Experimental investigation of wall film renewal in liquid-liquid slug flow

Cover Image International Journal of Multiphase Flow, Bd. 85, 2016, S. 177–185

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.ijmultiphaseflow.2016.06.009

Godoy P, Widera A, Schmidt-Heck W, Campos G, Meyer C, Cadenas C, Reif R, Stöber R, Hammad S, Pütter L, Gianmoena K, Marchan R, Ghallab A, Edlund K, Nüssler A, Thasler WE, Damm G, Seehofer D, Weiss TS, Dirsch O, Dahmen U, Gebhardt R, Chaudhari U, Meganathan K, Sachinidis A, Kelm J, Hofmann U, Zahedi RP, Guthke R, Blüthgen N, Dooley S, Hengstler JG.

Gene network activity in cultivated primary hepatocytes is highly similar to diseased mammalian liver tissue

Archives of Toxicology, Bd. 90, Nr. 10, 2016, S. 2513–2529

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1007/s00204-016-1761-4

Rudashevskaya EL, Sickmann A, Markoutsa S.

Global profiling of protein complexes: current approaches and their perspective in biomedical research

current approaches and their perspective in biomedical research

Expert Review of Proteomics, Bd. 13, Nr. 10, 2016, S. 951–964

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1080/14789450.2016.1233064

Reza M, Laval SH, Roos A, Carr S, Lochmüller H.

Optimization of Internally Deleted Dystrophin Constructs

Human Gene Therapy Methods, Bd. 27, Nr. 5, 2016, S. 174–186

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1089/hgtb.2016.026

Ciregia F, Kollipara L, Giusti L, Zahedi RP, Giacomelli C, Mazzoni MR, Giannaccini G, Scarpellini P, Urbani A, Sickmann A, Lucacchini A, Bazzichi L.

Bottom-up proteomics suggests an association between differential expression of mitochondrial proteins and chronic fatigue syndrome

Translational Psychiatry, Bd. 6, Nr. 9, 2016, S. e904

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1038/tp.2016.184

Brandt S, Schütz A, Klute D, Kratzer J, Franzke J.

Dielectric barrier discharges applied for optical spectrometry

Spectrochimica Acta Part B-Atomic Spectroscopy, Bd. 123, 2016, S. 6–32

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.sab.2016.07.001

Antweiler N, Gatberg S, Jestel G, Franzke J, Agar DW.

Noninvasive Sensor for the Detection of Process Parameters for Multiphase Slug Flows in Microchannels

ACS Sensors, Bd. 1, Nr. 9, 2016, S. 1117–1123

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1021/acssensors.6b00420

Kormunda M, Fischer D, Hertwig A, Beck U, Sebik M, Esser N.

Preparation of pulsed DC magnetron deposited Fe-doped SnO2 coatings

Physica Status Solidi (A) - Applications and Materials Science, Bd. 213, Nr. 9, 2016, S. 2303–2309

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1002/pssa.201532882

Furchner A, Kratz C, Gkogkou D, Ketelsen H, Hinrichs K.

Infrared-spectroscopic single-shot laser mapping ellipsometry

Proof of concept for fast investigations of structured surfaces and interactions in organic thin films

Applied Surface Science, Bd. 421, 2016, S. 440–445

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.apsusc.2016.08.140

Engel J, Becker C, Lategahn J, Keul M, Ketzer J, Mühlenberg T, Kollipara L, Schultz-Fademrecht C, Zahedi RP, Bauer S, Rauh D.

Insight into the Inhibition of Drug-Resistant Mutants of the Receptor Tyrosine Kinase EGFR

Angewandte Chemie (International ed. in English), Bd. 55, Nr. 36, 2016, S. 10909–10912

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1002/anie.201605011

Solari F, Mattheij NJA, Burkhart JM, Swieringa F, Collins PW, Cosemans JMEM, Sickmann A, Heemskerk JWM, Zahedi RP.

Combined Quantification of the Global Proteome, Phosphoproteome, and Proteolytic Cleavage to Characterize Altered Platelet Functions in the Human Scott Syndrome

Molecular & Cellular Proteomics, Bd. 15, Nr. 10, 2016, S. 3154–3169

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1074/mcp.M116.060368

Klute D, Schütz A, Michels A, Vadla C, Veza D, Horvatic V, Franzke J.

An experimental study on the influence of trace impurities on ionization of atmospheric noble gas dielectric barrier discharges

Analyst, Bd. 141, Nr. 20, 2016, S. 5842–5848

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1039/c6an01352j

Speiser E, Esser N, Wippermann S, Schmidt WG.

Surface vibrational Raman modes of In:Si(111)(4x1) and (8x2) nanowires

Si(111)(4 x 1) and (8 x 2) nanowires

Physical Review B, Bd. 94, Nr. 7, 2016, S. 75417

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1103/PhysRevB.94.075417

Gavriljuk K, Schartner J, Seidel H, Dickhut C, Zahedi RP, Hedberg C, Kötting C, Gerwert K.

Unraveling the Phosphocholination Mechanism of the Legionella pneumophila Enzyme AnkX

Biochemistry, Bd. 55, Nr. 31, 2016, S. 4375–4385

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1021/acs.biochem.6b00524

Brietz A, Schuch KV, Wangorsch G, Lorenz K, Dandekar T.

Analyzing ERK 1/2 signalling and targets

Molecular bioSystems, Bd. 12, Nr. 8, 2016, S. 2436–2446

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1039/C6MB00255B

Bracht T, Mölleken C, Ahrens M, Poschmann G, Schlosser A, Eisenacher M, Stühler K, Meyer H, Schmiegel WH, Holmskov U, Sorensen GL, Sitek B.

Evaluation of the biomarker candidate MFAP4 for non-invasive assessment of hepatic fibrosis in hepatitis C patients

Journal of translational medicine, Bd. 14, Nr. 1, 2016, S. 201

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1186/s12967-016-0952-3

Lodrini M, Poschmann G, Schmidt V, Wünschel J, Dreidax D, Witt O, Höfer T, Meyer H, Stühler K, Eggert A, Deubzer HE.

Minichromosome Maintenance Complex Is a Critical Node in the miR-183 Signaling Network of MYCN-Amplified Neuroblastoma Cells

Journal of Proteome Research, Bd. 15, Nr. 7, 2016, S. 2178–2186

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1021/acs.jproteome.6b00134

Jeckelmann E, Sanna S, Schmidt WG, Speiser E, Esser N.

Grand canonical Peierls transition in In/Si(111)

Physical Review B, Bd. 93, Nr. 24, 2016, S. 241407

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1103/PhysRevB.93.241407

Fernando RN, Chaudhari U, Escher SE, Hengstler JG, Hescheler J, Jennings P, Keun HC, Kleinjans JCS, Kolde R, Kollipara L, Kopp-Schneider A, Limonciel A, Nemade H, Nguemo F, Peterson H, Prieto P, Rodrigues RM, Sachinidis A, Schäfer C, Sickmann A, Spitkovsky D, Stöber R, van Breda SGJ, van de Water B, Vivier M, Zahedi RP, Vinken M, Rogiers V.

"Watching the Detectives" report of the general assembly of the EU project DETECTIVE Brussels, 24-25 November 2015

Archives of Toxicology, Bd. 90, Nr. 6, 2016, S. 1529–1539

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1007/s00204-016-1719-6

Bauer J, Wehland M, Pietsch J, Sickmann A, Weber G, Grimm D.

Annotated Gene and Proteome Data Support Recognition of Interconnections Between the Results of Different Experiments in Space Research

Microgravity Science and Technology, Bd. 28, Nr. 3, 2016, S. 357–365

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1007/s12217-015-9451-z

Neumann MD, Esser N, Chaveau JM, Goldhahn R, Feneberg M.

Inversion of absorption anisotropy and bowing of crystal field splitting in wurtzite MgZnO

Applied Physics Letters, Bd. 108, Nr. 22, 2016, S. 221105

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1063/1.4953159

Buchkremer S, González Coraspe JA, Weis J, Roos A.

Sil1-Mutant Mice Elucidate Chaperone Function in Neurological Disorders

Journal of Neuromuscular Diseases, Bd. 3, Nr. 2, 2016, S. 169–181

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.3233/JND-160152

Behrens B, Baune M, Jungkeit J, Tiso T, Blank LM, Hayen H.

High performance liquid chromatography-charged aerosol detection applying an inverse gradient for quantification of rhamnolipid biosurfactants

Journal of Chromatography A, Bd. 1455, 2016, S. 125–132

Type: Zeitschriftenbeitrag