Publikationen

Beck F, Geiger J, Gambaryan S, Solari F, Dell'Aica M, Loroch S, Mattheij NJA, Mindukshev I, Pötz O, Jurk K, Burkhart J, Fufezan C, Heemskerk JWM, Walter U, Zahedi RP, Sickmann A.

Temporal quantitative phosphoproteomics of ADP stimulation reveals novel central nodes in platelet activation and inhibition

Blood, Bd. 129, Nr. 2, 2017, S. E1–E12

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1182/blood-2016-05-714048

Vettel C, Lindner M, Dewenter M, Lorenz K, Schanbacher C, Riedel M, Lämmle S, Meinecke S, Mason FE, Sossalla S, Geerts A, Hoffmann M, Wunder F, Brunner FJ, Wieland T, Mehel H, Karam S, Lechêne P, Leroy J, Vandecasteele G, Wagner M, Fischmeister R, El-Armouche A.

Phosphodiesterase 2 Protects Against Catecholamine-Induced Arrhythmia and Preserves Contractile Function After Myocardial Infarction

Circulation Research, Bd. 120, Nr. 1, 2017, S. 120–132

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1161/CIRCRESAHA.116.310069

Lenssen JE, Shpacovitch V, Siedhoff D, Libuschewski P, Hergenröder R, Weichert F.

A review of Nano-Particle Analysis with the PAMONO-Sensor

IFSA Publishing, S.L, Bd. 1, 2017, S. 81–100

Reihe: Advances in Biosensors: Reviews

Type: Buchbeitrag

ISBN: 978-84-697-3467-4

de Oliva Novo PJ, Jender M, Dell'Aica M, Zahedi RP, Janasek D.

Free Flow Electrophoresis Separation of Proteins and DNA Using Microfluidics and Polycarbonate Membranes

Procedia Engineering, Bd. 168, 2017, S. 1382–1385

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.proeng.2016.11.385

de Oliva Novo PJ, Dell'Aica M, Janasek D, Zahedi RP.

High Temporal Resolution Study of Phosphorylation Events in HEK Cells Using a Micromixer Microfluidic Device

Procedia Engineering, Bd. 168, 2017, S. 1430–1433

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.proeng.2016.11.407

Brauers E, Roos A, Kollipara L, Zahedi RP, Beckmann A, Mohanadas N, Bauer H, Häusler M, Thoma S, Kress W, Senderek J, Weis J.

The Caveolin-3 G56S sequence variant of unknown significance

Proteomics. Clinical applications, Bd. 11, Nr. 1-2, 2017

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1002/prca.201600007

Wolf EV, Verhelst SHL.

Activity-based protein profiling

John Wiley and Sons, 2017, S. 305–333

Reihe: Chemoselective and bioorthogonal ligation chemistries: concepts and applications

Type: Buchbeitrag

ISBN: 978-3-527-33436-0

Esser N, Speiser E.

Raman Scattering at Surfaces

Springer, Bd. 45B, 2017

Reihe: Physics of Solid Surfaces

Type: Buchbeitrag

ISBN: 978-3-662-53906-4

van Kersavond T, Nguyen TNM, Verhelst SHL.

Synthesis and application of activity-based probes for proteases

Springer New York, Bd. 1574, 2017, S. 255–266

Reihe: Methods in molecular biology

Type: Buchbeitrag

DOI: /doi.org/10.1007/978-1-4939-6850-3_19

Mohammed Y, Bhowmick P, Smith DS, Domanski D, Jackson AM, Michaud SA, Malchow S, Percy AJ, Chambers AG, Palmer A, Zhang S, Sickmann A, Borchers CH.

PeptideTracker

Proteomics, Bd. 17, Nr. 7, 2016

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1002/pmic.201600210

Hofney Othman A, Meyer C, Telfah A, Lambert J, Hergenröder R, Dooley S, Hammad S.

Tamoxifen is critical as inducer of Cre activity in mouse models for hepatotoxicity studies

Zeitschrift für Gastroenterologie, Bd. 54, Nr. 12, 2016, S. 1343–1404

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1055/s-0036-1597371

Liebhaber M, Halbig B, Bass U, Geurts J, Neufeld S, Sanna S, Schmidt WG, Speiser E, Räthel J, Chandola S, Esser N.

Vibration eigenmodes of the Au-(5 x 2)/Si(111) surface studied by Raman spectroscopy and first-principles calculations

Physical Review B, Bd. 94, Nr. 23, 2016, S. 235304

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1103/PhysRevB.94.235304

Tinnefeld V, Venne S, Sickmann A, Zahedi RP.

Enrichment of Cross-Linked Peptides Using Charge-Based Fractional Diagonal Chromatography (ChaFRADIC)

Journal of Proteome Research, Bd. 16, Nr. 2, 2016, S. 459–469

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1021/acs.jproteome.6b00587

Gkogkou D, Shaykhutdinov T, Oates T, Gernert U, Schreiber B, Facsko S, Hildebrandt P, Weidinger IM, Esser N, Hinrichs K.

Characterization of anisotropically shaped silver nanoparticle arrays via spectroscopic ellipsometry supported by numerical optical modeling

Applied Surface Science, Bd. 421, 2016, S. 460–464

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.apsusc.2016.10.105

Zahedi RP.

Joining forces - studying multiple post-translational modifications to understand dynamic disease mechanisms

Expert Review of Proteomics, Bd. 13, Nr. 12, 2016, S. 1055–1057

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1080/14789450.2016.1231577

Pett C, Cai H, Liu J, Palitzsch B, Schorlemer M, Hartmann S, Stergiou N, Lu M, Kunz H, Schmitt E, Westerlind U.

Microarray Analysis of Antibodies Induced with Synthetic Antitumor Vaccines

Chemistry-A European Journal, Bd. 23, Nr. 16, 2016, S. 3875–3884

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1002/chem.201603921

Pagel O, Walter E, Jurk K, Zahedi RP.

Taking the stock of granule cargo

Platelets, Bd. 28, Nr. 2, 2016, S. 119–128

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1080/09537104.2016.1254762

Gonczarowska-Jorge H, Zahedi RP, Sickmann A.

The proteome of baker's yeast mitochondria

Mitochondrion, Bd. 33, 2016, S. 15–21

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.mito.2016.08.007

Gogiashvili M, Edlund K, Gianmoena K, Marchan R, Bryk O, Andersson JT, Lambert J, Madjar K, Hellwig B, Rahnenführer J, Hengstler JG, Hergenröder R, Cadenas C.

Metabolic profiling of ob/ob mouse fatty liver using HR-MAS H-1-NMR combined with gene expression analysis reveals alterations in betaine metabolism and the transsulfuration pathway

Analytical and Bioanalytical Chemistry, Bd. 409, Nr. 6, 2016, S. 1591–1606

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1007/s00216-016-0100-1

Verhelst SHL.

Intramembrane proteases as drug targets

The FEBS-Journal, Bd. 284, Nr. 10, 2016, S. 1489–1502

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1111/febs.13979

Fischer D, Hertwig A, Beck U, Negendank D, Lohse V, Kormunda M, Esser N.

Dependence of the optical constants and the performance in the SPREE gas measurement on the thickness of doped tin oxide over coatings

Applied Surface Science, Bd. 421, 2016, S. 480–486

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.apsusc.2016.11.188

Psatha K, Kollipara L, Voutyraki C, Divanach P, Sickmann A, Rassidakis GZ, Drakos E, Aivaliotis M.

Deciphering lymphoma pathogenesis via state-of-the-art mass spectrometry-based quantitative proteomics

Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences, Bd. 1047, 2016, S. 2–14

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.jchromb.2016.11.005

Alame S, Navarro-Quezada A, Skuridina D, Reich C, Henning D, Frentrup M, Wernicke T, Koslow I, Kneissl M, Esser N, Vogt P.

Preparation and structure of ultra-thin GaN (0001) layers on In0.11Ga0.89N-single quantum wells

Materials Science in Semiconductor Processing, Bd. 55, 2016, S. 7–11

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.mssp.2016.02.013

Petersen D, Mavarani L, Niedieker D, Freier E, Tannapfel A, Kötting C, Gerwert K, El-Mashtoly SF.

Virtual staining of colon cancer tissue by label-free Raman micro-spectroscopy

Analyst, Bd. 142, Nr. 8, 2016, S. 1207–1215

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1039/c6an02072k

Bartels MF, Winterhalter PR, Yu J, Liu Y, Lommel M, Möhrlen F, Hu H, Feizi T, Westerlind U, Ruppert T, Strahl S.

Protein O-Mannosylation in the Murine Brain

PLOS One, Bd. 11, Nr. 11, 2016

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1371/journal.pone.0166119

Cuello F, Lorenz K.

Inhibition of cardiac CaMKII to cure heart failure: Step by step towards translation?

Basic Research in Cardiology, Bd. 111, Nr. 66, 2016, S. 1–4

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1007/s00395-016-0582-1

Kratz C, Oates T, Hinrichs K.

Optimization and quantification of surface enhanced infrared absorption using gradient gold island films

Thin Solid Films, Bd. 617, Nr. A, 2016, S. 33–37

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.tsf.2016.02.019

Reifschneider O, Marx C, Jacobs J, Kollipara L, Sickmann A, Wolters D, Kück U.

A Ribonucleoprotein Supercomplex Involved in trans-Splicing of Organelle Group II Introns

Journal of Biological Chemistry, Bd. 291, Nr. 44, 2016, S. 23330–23342

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1074/jbc.M116.750570

Xing Y, Esser N, Dittrich PS.

Conductive single nanowires formed and analysed on microfluidic devices

Journal of Materials Chemistry C, Bd. 4, Nr. 39, 2016, S. 9235–9244

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1039/C6TC02791A

Pietrowska M, Diehl HC, Mrukwa G, Kalinowska-Herok M, Gawin M, Chekan M, Elm J, Drazek G, Krawczyk A, Lange D, Meyer HE, Polanska J, Henkel C, Widlak P.

Molecular profiles of thyroid cancer subtypes

Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics, Bd. 1865, Nr. 7, 2016, S. 837–845

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.bbapap.2016.10.006

Roos A, Kollipara L, Buchkremer S, Labisch T, Brauers E, Gatz C, Lentz C, Gerardo-Nava J, Weis J, Zahedi RP.

Cellular Signature of SIL1 Depletion

Molecular Neurobiology, Bd. 53, Nr. 8, 2016, S. 5527–5541

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1007/s12035-015-9456-z

Arsenjuk L, Kaske F, Franzke J, Agar DW.

Experimental investigation of wall film renewal in liquid-liquid slug flow

Cover Image International Journal of Multiphase Flow, Bd. 85, 2016, S. 177–185

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.ijmultiphaseflow.2016.06.009

Godoy P, Widera A, Schmidt-Heck W, Campos G, Meyer C, Cadenas C, Reif R, Stöber R, Hammad S, Pütter L, Gianmoena K, Marchan R, Ghallab A, Edlund K, Nüssler A, Thasler WE, Damm G, Seehofer D, Weiss TS, Dirsch O, Dahmen U, Gebhardt R, Chaudhari U, Meganathan K, Sachinidis A, Kelm J, Hofmann U, Zahedi RP, Guthke R, Blüthgen N, Dooley S, Hengstler JG.

Gene network activity in cultivated primary hepatocytes is highly similar to diseased mammalian liver tissue

Archives of Toxicology, Bd. 90, Nr. 10, 2016, S. 2513–2529

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1007/s00204-016-1761-4

Rudashevskaya EL, Sickmann A, Markoutsa S.

Global profiling of protein complexes: current approaches and their perspective in biomedical research

Expert Review of Proteomics, Bd. 13, Nr. 10, 2016, S. 951–964

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1080/14789450.2016.1233064

Reza M, Laval SH, Roos A, Carr S, Lochmüller H.

Optimization of Internally Deleted Dystrophin Constructs

Human Gene Therapy Methods, Bd. 27, Nr. 5, 2016, S. 174–186

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1089/hgtb.2016.026

Ciregia F, Kollipara L, Giusti L, Zahedi RP, Giacomelli C, Mazzoni MR, Giannaccini G, Scarpellini P, Urbani A, Sickmann A, Lucacchini A, Bazzichi L.

Bottom-up proteomics suggests an association between differential expression of mitochondrial proteins and chronic fatigue syndrome

Translational Psychiatry, Bd. 6, Nr. 9, 2016, S. e904

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1038/tp.2016.184

Brandt S, Schütz A, Klute D, Kratzer J, Franzke J.

Dielectric barrier discharges applied for optical spectrometry

Spectrochimica Acta Part B-Atomic Spectroscopy, Bd. 123, 2016, S. 6–32

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.sab.2016.07.001

Antweiler N, Gatberg S, Jestel G, Franzke J, Agar DW.

Noninvasive Sensor for the Detection of Process Parameters for Multiphase Slug Flows in Microchannels

ACS Sensors, Bd. 1, Nr. 9, 2016, S. 1117–1123

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1021/acssensors.6b00420

Kormunda M, Fischer D, Hertwig A, Beck U, Sebik M, Esser N.

Preparation of pulsed DC magnetron deposited Fe-doped SnO2 coatings

Physica Status Solidi (A) - Applications and Materials Science, Bd. 213, Nr. 9, 2016, S. 2303–2309

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1002/pssa.201532882

Furchner A, Kratz C, Gkogkou D, Ketelsen H, Hinrichs K.

Infrared-spectroscopic single-shot laser mapping ellipsometry

Applied Surface Science, Bd. 421, 2016, S. 440–445

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.apsusc.2016.08.140

Engel J, Becker C, Lategahn J, Keul M, Ketzer J, Mühlenberg T, Kollipara L, Schultz-Fademrecht C, Zahedi RP, Bauer S, Rauh D.

Insight into the Inhibition of Drug-Resistant Mutants of the Receptor Tyrosine Kinase EGFR

Angewandte Chemie (International ed. in English), Bd. 55, Nr. 36, 2016, S. 10909–10912

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1002/anie.201605011

Solari F, Mattheij NJA, Burkhart JM, Swieringa F, Collins PW, Cosemans JMEM, Sickmann A, Heemskerk JWM, Zahedi RP.

Combined Quantification of the Global Proteome, Phosphoproteome, and Proteolytic Cleavage to Characterize Altered Platelet Functions in the Human Scott Syndrome

Molecular & Cellular Proteomics, Bd. 15, Nr. 10, 2016, S. 3154–3169

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1074/mcp.M116.060368

Klute D, Schütz A, Michels A, Vadla C, Veza D, Horvatic V, Franzke J.

An experimental study on the influence of trace impurities on ionization of atmospheric noble gas dielectric barrier discharges

Analyst, Bd. 141, Nr. 20, 2016, S. 5842–5848

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1039/c6an01352j

Speiser E, Esser N, Wippermann S, Schmidt WG.

Surface vibrational Raman modes of In:Si(111)(4x1) and (8x2) nanowires

Physical Review B, Bd. 94, Nr. 7, 2016, S. 75417

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1103/PhysRevB.94.075417

Gavriljuk K, Schartner J, Seidel H, Dickhut C, Zahedi RP, Hedberg C, Kötting C, Gerwert K.

Unraveling the Phosphocholination Mechanism of the Legionella pneumophila Enzyme AnkX

Biochemistry, Bd. 55, Nr. 31, 2016, S. 4375–4385

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1021/acs.biochem.6b00524

Brietz A, Schuch KV, Wangorsch G, Lorenz K, Dandekar T.

Analyzing ERK 1/2 signalling and targets

Molecular bioSystems, Bd. 12, Nr. 8, 2016, S. 2436–2446

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1039/C6MB00255B

Lodrini M, Poschmann G, Schmidt V, Wünschel J, Dreidax D, Witt O, Höfer T, Meyer HE, Stühler K, Eggert A, Deubzer HE.

Minichromosome Maintenance Complex Is a Critical Node in the miR-183 Signaling Network of MYCN-Amplified Neuroblastoma Cells

Journal of Proteome Research, Bd. 15, Nr. 7, 2016, S. 2178–2186

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1021/acs.jproteome.6b00134

Jeckelmann E, Sanna S, Schmidt WG, Speiser E, Esser N.

Grand canonical Peierls transition in In/Si(111)

Physical Review B, Bd. 93, Nr. 24, 2016, S. 241407

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1103/PhysRevB.93.241407

Fernando RN, Chaudhari U, Escher SE, Hengstler JG, Hescheler J, Jennings P, Keun HC, Kleinjans JCS, Kolde R, Kollipara L, Kopp-Schneider A, Limonciel A, Nemade H, Nguemo F, Peterson H, Prieto P, Rodrigues RM, Sachinidis A, Schäfer C, Sickmann A, Spitkovsky D, Stöber R, van Breda SGJ, van de Water B, Vivier M, Zahedi RP, Vinken M, Rogiers V.

"Watching the Detectives" report of the general assembly of the EU project DETECTIVE Brussels, 24-25 November 2015

Archives of Toxicology, Bd. 90, Nr. 6, 2016, S. 1529–1539

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1007/s00204-016-1719-6

Bauer J, Wehland M, Pietsch J, Sickmann A, Weber G, Grimm D.

Annotated Gene and Proteome Data Support Recognition of Interconnections Between the Results of Different Experiments in Space Research

Microgravity Science and Technology, Bd. 28, Nr. 3, 2016, S. 357–365

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1007/s12217-015-9451-z