Publikationen

van de Plassche MAT, O'Neill TJ, Seeholzer T, Turk B, Krappmann D, Verhelst SHL.

Use of Non-Natural Amino Acids for the Design and Synthesis of a Selective, Cell-Permeable MALT1 Activity-Based Probe

Journal of Medicinal Chemistry, Bd. 63, Nr. 8, 2020, S. 3996–4004

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1021/acs.jmedchem.9b01879

Kopczynski D, Hoffmann N, Peng B, Ahrends R.

Goslin - A Grammar of Succinct Lipid Nomenclature

Cold Spring Harbor Laboratory Press, 2020

Reihe: BioRxiv

Type: Buchbeitrag

DOI: /doi.org/10.1101/2020.04.17.046656

Hinrichs K, Kratz C, Furchner A.

Hyperspectral mid-infrared ellipsometric measurements in the twinkling of an eye

Spectroscopy Europe, Bd. 2020, Nr. 32 (2), 2020, S. 10–14

Type: Zeitschriftenbeitrag

DOI: /doi.org/https://www.spectroscopyeurope.com/article/hyperspectral-mid-infrared-ellipsometric-measurements-twinkling-eye

Tomasovic A, Brand T, Schanbacher C, Kramer S, Hümmert MW, Godoy P, Schmidt-Heck W, Nordbeck P, Ludwig J, Homann S, Wiegering A, Shaykhutdinov T, Kratz C, Knüchel R, Müller-Hermelink HK, Rosenwald A, Frey N, Eichler J, Dobrev D, El-Armouche A, Hengstler JG, Müller OJ, Hinrichs K, Cuello F, Zernecke A, Lorenz K.

Interference with ERK-dimerization at the nucleocytosolic interface targets pathological ERK1/2 signaling without cardiotoxic side-effects

Nature Communications, Bd. 11, Nr. 1, 2020

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1038/s41467-020-15505-4

Braun C, Neufeld , Gerstmann U, Sanna S, Plaickner J, Speiser E, Esser N, Schmidt WG.

Vibration Driven Self-Doping of Dangling-Bond Wires on Si(553)-Au Surfaces

Physical Review Letters, Bd. 2020, Nr. 124, 2020

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1103/PhysRevLett.124.146802

Grimmer J, Helm S, Dobritzsch D, Hause G, Shema G, Zahedi RP, Baginsky S.

Mild proteasomal stress improves photosynthetic performance in Arabidopsis chloroplasts

Nature Communications, Bd. 11, Nr. 1, 2020

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1038/s41467-020-15539-8

Makepeace K, Mohammed Y, Rudashevskaya E, Petrotchenko E, Vögtle FN, Meisinger C, Sickmann A, Borchers C.

Improving Identification of In-organello Protein-Protein Interactions Using an Affinity-enrichable, Isotopically Coded, and Mass Spectrometry-cleavable Chemical Crosslinker

Molecular & Cellular Proteomics, Bd. 19, Nr. 4, 2020, S. 624–639

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1074/mcp.RA119.001839

Barniol-Xicota M, Verhelst SHL.

Isolation of intramembrane proteases in membrane-like environments

Biochimica et biophysica acta-Biomembranes, Bd. 1862, Nr. 4, 2020

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.bbamem.2020.183193

Duscha A, Gisevius B, Hirschberg S, Yissachar N, Stangl GI, Eilers E, Bader V, Haase S, Kaisler J, David C, Schneider R, Troisi R, Zent D, Hegelmaier T, Dokalis N, Gerstein S, Del Mare-Roumani S, Amidror S, Staszewski O, Poschmann G, Stühler K, Hirche F, Balogh A, Kempa S, Träger P, Zaiss MM, Holm JB, Massa MG, Nielsen HB, Faissner A, Lukas C, Gatermann SG, Scholz M, Przuntek H, Prinz M, Forslund SK, Winklhofer KF, Müller DN, Linker RA, Haghikia A.

Propionic Acid Shapes the Multiple Sclerosis Disease Course by an Immunomodulatory Mechanism

Cell, Bd. 180, Nr. 6, 2020, S. 1067–1080.e16

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.cell.2020.02.035

Xuan Y, Bateman NW, Gallien S, Goetze S, Zhou Y, Navarro P, Hu M, Parikh N, Hood BL, Conrads KA, Looße C, Birhanu Kitata R, Piersma SR, Chiasserini D, Zhu H, Hou G, Tahir M, Macklin A, Khoo A, Sun X, Crossett B, Sickmann A, Chen YJ, Jimenez CR, Zhou H, Liu S, Larsen MR, Kislinger T, Chen Z, Parker BL, Cordwell SJ, Wollscheid B, Conrads TP.

Standardization and Harmonization of Distributed Multi-National Proteotype Analysis supporting Precision Medicine Studies

Nature Communications, 2020, S. 2020.03.12.988089

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1101/2020.03.12.988089

von Bohlen A, Fernández-Ruiz R.

Experimental evidence of matrix effects in total-reflection X-ray fluorescence analysis: Coke case

Talanta, Bd. 209, Nr. 209, 2020

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.talanta.2019.120562

Ueki H, Wang IH, Zhao D, Gunzer M, Kawaoka Y.

Multicolor two-photon imaging of in vivo cellular pathophysiology upon influenza virus infection using the two-photon IMPRESS

Nature protocols, Bd. 15, Nr. 3, 2020, S. 1041–1065

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1038/s41596-019-0275-y

Töpf A, Oktay Y, Balaraju S, Yilmaz E, Sonmezler E, Yis U, Laurie S, Thompson R, Roos A, MacArthur DG, Yaramis A, Gungor S, Lochmüller H, Hiz S, Horvath R.

Severe neurodevelopmental disease caused by a homozygous TLK2 variant

European journal of human genetics, Bd. 28, Nr. 3, 2020, S. 383–387

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1038/s41431-019-0519-x

Czech-Sioli M, Siebels S, Radau S, Zahedi RP, Schmidt C, Dobner T, Grundhoff A, Fischer N.

The Ubiquitin-Specific Protease Usp7, a Novel Merkel Cell Polyomavirus Large T-Antigen Interaction Partner, Modulates Viral DNA Replication

Journal of Virology, Bd. 94, Nr. 5, 2020

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1128/JVI.01638-19

Plaickner J, Esser N, Halbig B, Geurts J, Schmidt WG, Sanna S.

Vibrational Raman spectroscopy on adsorbate-induced low-dimensional surface structures

Surface Science Reports, Bd. 75, Nr. 1, 2020

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.surfrep.2020.100480

Camparini L, Kollipara L, Sinagra G, Loffredo FS, Sickmann A, Shevchuk O.

Targeted Approach to Distinguish and Determine Absolute Levels of GDF8 and GDF11 in Mouse Serum

Proteomics, Bd. 20, Nr. 11, 2020, S. e1900104

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1002/pmic.201900104

Amich J, Mokhtari Z, Strobel M, Vialetto E, Sheta D, Yu Y, Hartweg J, Kalleda N, Jarick KJ, Brede C, Jordán-Garrote AL, Thusek S, Schmiedgen K, Arslan B, Pinnecker J, Thornton CR, Gunzer M, Krappmann S, Einsele H, Heinze KG, Beilhack A.

Three-Dimensional Light Sheet Fluorescence Microscopy of Lungs To Dissect Local Host Immune-Aspergillus fumigatus interactions

mBio, Bd. 11, Nr. 1, 2020, S. e02752–19

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1128/mBio.02752-19

van Veen S, Martin S, Van den Haute C, Benoy V, Lyons J, Vanhoutte R, Kahler JP, Decuypere JP, Gelders G, Lambie E, Zielich J, Swinnen JV, Annaert W, Agostinis P, Ghesquiere B, Verhelst SHL, Baekelandt V, Eggermont J, Vangheluwe P.

ATP13A2 deficiency disrupts lysosomal polyamine export

Nature, Bd. 578, Nr. 7795, 2020, S. 419–424

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1038/s41586-020-1968-7

Kumm EJ, Pagel O, Gambaryan S, Walter U, Zahedi RP, Smolenski A, Jurk K.

The Cell Cycle Checkpoint System MAST(L)-ENSA/ARPP19-PP2A is Targeted by cAMP/PKA and cGMP/PKG in Anucleate Human Platelets

Cells, Bd. 9, Nr. 2, 2020

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.3390/cells9020472

Knodel A, Marggraf U, Ahlmann N, Brandt S, Foest D, Gilbert López B, Franzke J.

Standardization of Sandwich-Structured Cu–Glass Substrates Embedded in a Flexible Diode Laser–Plasma Interface for the Detection of Cholesterol

Analytical Chemistry, 2020

Type: Zeitschriftenbeitrag

Jender M, Novo P, Mähler D, Münchberg U, Janasek D, Freier E.

Multiplexed Online-Monitoring of Microfluidic Free-Flow Electrophoresis via Mass Spectrometry

ChemRxiv, 2020

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.26434/chemrxiv.11848422.v1

Li H, Münchberg U, Oughli AA, Buesen D, Lubitz W, Freier E, Plumeré N.

Suppressing hydrogen peroxide generation to achieve oxygen-insensitivity of a [NiFe] hydrogenase in redox active films

Nature Communications, Bd. 11, Nr. 1, 2020, S. 920

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1038/s41467-020-14673-7

Plaickner J, Speiser E, Chandola S, Esser N, Singh DK.

Adsorption of toluene-3,4-dithiol on silver islands investigated by surface-enhanced Raman spectroscopy

Journal of Raman Spectroscopy, 2020

Type: Zeitschriftenbeitrag

Hoffmann N, Kopczynski D, Al Machot F, Miranda Ackermann J, Sickmann A, Schwudke D, Shevchenko A, Ahrends R.

Lipidomik: wie Lipide die Blutgerinnung steuern

2020

Reihe: de.NBI Use Case Broschüre 2020

Type: Buchbeitrag

Soni H, Bode J, Nguyen DLC, Puccio L, Nessling M, Piro RM, Bub J, Phillips E, Ahrends R, Eipper BA, Tews B, Goidts V.

PERK-mediated expression of peptidylglycine alpha-amidating monooxygenase supports angiogenesis in glioblastoma

Oncogenesis, Bd. 9, Nr. 2, 2020, S. 18

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1038/s41389-020-0201-8

Asheghali D, Lee SJ, Furchner A, Gruzd A, Larson S, Tokarev A, Stake S, Zhou X, Hinrichs K, Zhang LG, Minko S.

Enhanced neuronal differentiation of neural stem cells with mechanically enhanced touch-spun nanofibrous scaffolds

Nanomedicine: Nanotechnology, Biology and Medicine, Bd. 24, 2020

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.nano.2020.102152

Märker R, Blank-Landeshammer B, Beier-Rosberger A, Sickmann A, Kück U.

Phosphoproteomic analysis of STRIPAK mutants identifies a conserved serine phosphorylation site in PAK kinase CLA4 to be important in fungal sexual development and polarized growth

Molecular Microbiology, Bd. 113, Nr. 6, 2020, S. 1053–1069

Type: Zeitschriftenbeitrag

DOI: /doi.org/doi: 10.1111/mmi.14475

Vautz W.

Die Ionenmobilitätsspektrometrie – eine immer noch unterschätzte analytische Technik

GIT Labor-Fachzeitschrift, 2020

Type: Zeitschriftenbeitrag

Muscolino E, Schmitz R, Loroch S, Caragliano E, Schneider C, Rizzato M, Kim Y, Krause E, Lisnić VJ, Sickmann A, Reimer R, Ostermann E, Brune W.

Herpesviruses Induce Aggregation and Selective Autophagy of Host Signalling Proteins NEMO and RIPK1 as an Immune-Evasion Mechanism

Nature Microbiology, Bd. 5, Nr. 2, 2020, S. 331–342

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1038/s41564-019-0624-1

Schleier L, Wiendl M, Heidbreder K, Binder MT, Atreya R, Rath T, Becker E, Schulz-Kuhnt A, Stahl A, Schulze LL, Ullrich K, Merz SF, Bornemann L, Gunzer M, Watson AJM, Neufert C, Atreya I, Neurath MF, Zundler S.

Non-classical monocyte homing to the gut via α4β7 integrin mediates macrophage-dependent intestinal wound healing

Gut, Bd. 69, Nr. 2, 2020, S. 252–263

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1136/gutjnl-2018-316772

Al-Ma’ani A, Al-Hiari Y, Kasabri V, Mamdooh N, Alalawi S, Telfah A.

Functionalised Triazoloquinolones as a Potentially Novel Class of Antidiabesity and Antiproliferative compounds: Synthesis and Pharmacological Appraisal

Analytical Chemistry Letter, Bd. 9, Nr. 6, 2020, S. 727–746

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1080/22297928.2019.1699857

Burhenn S, Kratzer J, Franzke J.

Temporal evolution of tellurium emission lines in a capillary dielectric barrier discharge after hydride generation

Spectrochimica Acta Part B-Atomic Spectroscopy, Bd. 2020, Nr. 171, 2020

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.sab.2020.105936

Furchner A, Kratz C, Ogieglo W, Pinnau I, Rappich J, Hinrichs K.

Ultrasensitive broadband infrared 4 × 4 Mueller-matrix ellipsometry for studies of depolarizing and anisotropic thin films

Journal of Vacuum Science & Technology B, Bd. 38, Nr. 1, 2020, S. 014003

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1116/1.5129800

Bandeira N, Barsnes H, Colon F, Deutsch E, Elias J, Gundry R, Hao S, Hoffmann N, Kennedy M, Kunath B, Martens L, Salz R, Sizochenko N, Vandenbrouck Y, Vitek O, Antonio Vizcaino J, Wollscheid B.

Working Group Report: Public Proteomics Data

Dagstuhl Reports, Bd. 9, 2019, S. 70–83

Reihe: Computational Proteomics (Dagstuhl Seminar 19351)

Type: Buchbeitrag

DOI: /doi.org/10.4230/DagRep.9.8.70

Vautz W, Seifert L, Mohammadi M, Klinkenberg I, Liedtke S.

Detection of axillary perspiration metabolites using ion mobility spectrometry coupled to rapid gas-chromatography

Analytical and Bioanalytical Chemistry, 2019, S. 1–10

Type: Zeitschriftenbeitrag

Knorrscheidt A, Püllmann P, Schell E, Homann D, Freier E, Weissenborn M.

Development of 96 Multiple Injection-GC-MS Technique and Its Application in Protein Engineering of Natural and Non-Natural Enzymatic Reactions

ChemRxiv, 2019

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.26434/chemrxiv.10314239.v1

Maimari T, Krasel C, Bünemann M, Lorenz K.

The N-termini of GRK2 and GRK3 simulate the stimulating effects of RKIP on β-adrenoceptors

Biochemical and Biophysical Research Communications, Bd. 520, Nr. 2, 2019, S. 327–332

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.bbrc.2019.09.135

Weingärtner O, Lütjohann D, Meyer S, Fuhrmann A, Cremers B, Seiler-Mußler S, Schött HF, Kerksiek A, Friedrichs S, Ulbricht U, Zawada AM, Laufs U, Schulze PC, Scheller B, Fliser D, Böhm M, Sijbrands E, Heine GH.

Low serum lathosterol levels associate with fatal cardiovascular disease and excess all-cause mortality:

Clinical research in Cardiology, Bd. 108, Nr. 12, 2019, S. 1381–1385

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1007/s00392-019-01474-2

Blank-Landeshammer B, Richard VR, Mitsa G, Marques M, LeBlanc A, Kollipara L, Feldmann I, Couetoux du Tertre M, Gambaro K, McNamara S, Spatz A, Zahedi RP, Sickmann A, Batist G, Borchers C.

Proteogenomics of Colorectal Cancer Liver Metastases

Cancers, Bd. 11, Nr. 12, 2019

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.3390/cancers11121907

Reinders Y, Pohl F, Ahrens N, Prantl L, Kühlmann B, Haubner F.

Impact of platelet-rich plasma on cell migration processes after external radiation.

Clinical Hemorheology and Microcirculation, Bd. 73, Nr. 1, 2019, S. 43–51

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.3233/CH-199218

Wibberg D, Batut B, Belmann P, Blom J, Glöckner FO, Hoffmann N, Grüning B, Kleinbölting N, Rahn R, Rey M, Scholz U, Sharan M, Tauch A, Trojahn U, Usadel B, Kohlbacher O.

The de.NBI / ELIXIR-DE training platform - Bioinformatics training in Germany and across Europe within ELIXIR

F1000 Research, Bd. 8, 2019, S. 1877

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.12688/f1000research.20244.1

Hinrichs K, Shaykhutdinov T, Kratz C, Furchner A.

Brilliant mid-infrared ellipsometry and polarimetry of thin films: Toward laboratory applications with laser based techniques

Journal of Vacuum Science & Technology B, Bd. 37, Nr. 6, 2019, S. 060801

Type: Zeitschriftenbeitrag

DOI: /doi.org/https://avs.scitation.org/doi/10.1116/1.5122869

Greda K, Burhenn S, Pohl P, Franzke J.

Enhancement of emission from indium in flowing liquid anode atmospheric pressure glow discharge using organic media

Talanta, Bd. 2019, Nr. 204, 2019, S. 304–309

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1016/j.talanta.2019.06.015

Drees C, Vautz W, Liedtke S, Rosin C, Althoff K, Lippmann M, Zimmermann S, Legler T, Yildiz D, Perl T, Kunze-Szikszay N.

GC-IMS headspace analyses allow early recognition of bacterial growth and rapid pathogen differentiation in standard blood cultures

Applied Microbiology and Biotechnology, Bd. 103, Nr. 21-22, 2019, S. 9091–9101

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1007/s00253-019-10181-x

Vautz W, Hariharan C, Kayser O.

Fast Detection of Recent Cannabis sativa L. Consumption in Exhaled Breath using a Mobile Ion Mobility Spectrometer

Journal for Forensic Research and Crime Science, Bd. 2019, Nr. 3, 2019, S. 1–11

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.17303/jfrcs.2019.3.102

Blank-Landeshammer B, Teichert I, Märker R, Nowrousian M, Kück U, Sickmann A.

Combination of Proteogenomics with Peptide De Novo Sequencing Identifies New Genes and Hidden Posttranscriptional Modifications

mBio, Bd. 10, Nr. 5, 2019

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1128/mBio.02367-19

Hoffmann N, Hartler J, Ahrends R.

JmzTab-M - A reference parser, writer and validator for the PSI mzTab 2.0 metabolomics standard

Analytical Chemistry, Bd. 91, Nr. 20, 2019, S. 12615–12618

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1021/acs.analchem.9b01987

Lategahn J, Keul M, Kloevekorn P, Tumbrink HL, Niggenaber J, Mueller MP, Hodson L, Flasshoff M, Hardick J, Grabe T, Engel J, Schultz-Fademrecht C, Baumann M, Ketzer J, Muehlenberg T, Hiller W, Guenther G, Unger A, Mueller H, Heimsoeth A, Golz C, Blank-Landeshammer B, Kollipara L, Zahedi RP, Strohmann C, Hengstler JG, van Otterlo WAL, Bauer S, Rauh D.

Inhibition of osimertinib-resistant epidermal growth factor receptor EGFR-T790M/C797S

Chemical Science, Bd. 10, Nr. 46, 2019, S. 10789–10801

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1039/c9sc03445e

Jochmann S, Elkenani M, Mohamed BA, Buchholz E, Lbik D, Binder L, Lorenz K, Shah AM, Hasenfuß G, Toischer K, Schnelle M.

Assessing the role of extracellular signal-regulated kinases 1 and 2 in volume overload-induced cardiac remodelling

ESC heart failure, Bd. 6, Nr. 5, 2019, S. 1015–1026

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1002/ehf2.12497

Furchner A, Kratz C, Rappich J, Hinrichs K.

Hyperspectral Infrared Laser Polarimetry for Single-Shot Phase–Amplitude Imaging of Thin Films

Optics Letters, Bd. 44, Nr. 19, 2019, S. 4893–4896

Type: Zeitschriftenbeitrag

DOI: /doi.org/10.1364/OL.44.004893