Publications

Rampler E, Coman C, Hermann G, Sickmann A, Ahrends R, Koellensperger G.

LILY-lipidome isotope labeling of yeast

Analyst, Vol. 142, Nr. 11, 2017, P. 1891–1899

Type: Journal article

Schell C, Rogg M, Suhm M, Helmstädter M, Sellung D, Yasuda-Yamahara M, Kretz O, Küttner V, Suleiman H, Kollipara L, Zahedi RP, Sickmann A, Eimer S, S. Shaw A, Kramer-Zucker A, Hirano-Kobayashi M, Abe T, Aizawa S, Grahammer F, Hartleben B, Dengjel J, Huber TB.

The FERM protein EPB41L5 regulates actomyosin contractility and focal adhesion formation to maintain the kidney filtration barrier

Proceedings of the National Academy of Sciences of the United States of America, Vol. 114, Nr. 23, 2017, P. E4621–E4630

Type: Journal article

DOI: /doi.org/10.1073/pnas.1617004114

Lenssen JE, Shpacovitch V, Siedhoff D, Libuschewski P, Hergenröder R, Weichert F.

A review of Nano-Particle Analysis with the PAMONO-Sensor

IFSA Publishing, S.L, Vol. 1, 2017, P. 81–100

Book series: Advances in Biosensors: Reviews

Type: Book contribution

ISBN: 978-84-697-3467-4

Saleh MH, Ershaidat NM, Ahmad MJA, Bulos BN, Abdul-Gader Jafar MM.

Evaluation of spectral dispersion of optical constants of a-Se films from their normal-incidence transmittance spectra using Swanepoel algebraic envelope approach

Optical Review, Vol. 24, Nr. 3, 2017, P. 260–277

Type: Journal article

DOI: /doi.org/10.1007/s10043-017-0311-5

Schrötter A, Oberhaus A, Kolbe K, Seger S, Mastalski T, El Magraoui F, Hoffmann-Posorske E, Bohnert M, Deckert J, Braun C, Graw M, Schmitz C, Arzberger T, Loosse C, Heinsen H, Meyer HE, Müller T.

LMD proteomics provides evidence for hippocampus field-specific motor protein abundance changes with relevance to Alzheimer's disease

Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics, Vol. 1865, Nr. 6, 2017, P. 703–714

Type: Journal article

DOI: /doi.org/10.1016/j.bbapap.2017.03.013

Shaykhutdinov T, Pop SD, Furchner A, Hinrichs K.

Supramolecular Orientation in Anisotropic Assemblies by Infrared Nanopolarimetry

ACS Macro Letters, Vol. 6, Nr. 6, 2017, P. 598–602

Type: Journal article

DOI: /doi.org/10.1021/acsmacrolett.7b00147

C.Guguschev , J. Philippen , D. J. Kok , T. Markurt , D. Klimm , Hinrichs K, R. Uecker , R. Bertram , Bickermann M.

Czochralski growth and characterization of cerium doped calcium scandate

CrystEngComm, Vol. 19, Nr. 18, 2017, P. 2553–2560

Type: Journal article

DOI: /doi.org/10.1039/c7ce00445a

Zweerink S, Kallnik V, Ninck S, Nickel S, Verheyen J, Blum M, Wagner A, Feldmann I, Sickmann A, Albers SV, Bräsen C, Kaschani F, Siebers B, Kaiser M.

Activity-based protein profiling as a robust method for enzyme identification and screening in extremophilic Archaea

Nature Communications, Vol. 8, 2017, P. 15352

Type: Journal article

DOI: /doi.org/10.1038/ncomms15352

Azuma Y, Töpf A, Evangelista T, Lorenzoni PJ, Roos A, Viana P, Inagaki H, Kurahashi H, Lochmüller H.

Intragenic DOK7 deletion detected by whole-genome sequencing in congenital myasthenic syndromes

Neurology. Genetics, Vol. 3, Nr. 3, 2017, P. e152

Type: Journal article

DOI: /doi.org/10.1212/NXG.0000000000000152

Reimann J, Kohlschmidt N, Tolksdorf K, Weis J, Kuchelmeister K, Roos A.

Muscle Pathology as a Diagnostic Clue to Allgrove Syndrome

Journal of Neuropathology and Experimental Neurology, Vol. 76, Nr. 5, 2017, P. 337–341

Type: Journal article

DOI: /doi.org/10.1093/jnen/nlx016

Al-Gburi S, Deussen A, Zatschler B, Weber S, Künzel S, El-Armouche A, Lorenz K, Cybularz M, Morawietz H, Kopaliani I.

Sex-difference in expression and function of beta-adrenoceptors in macrovessels

Basic Research in Cardiology, Vol. 112, Nr. 3, 2017, P. 29

Type: Journal article

DOI: /doi.org/10.1007/s00395-017-0617-2

Xing Y, Sun G, Speiser E, Esser N, Dittrich PS.

Localized Synthesis of Conductive Copper-Tetracyanoquinodimethane Nanostructures in Ultrasmall Microchambers for Nanoelectronics

ACS Applied Materials & Interfaces, Vol. 9, Nr. 20, 2017, P. 17272–17279

Type: Journal article

DOI: /doi.org/10.1021/acsami.7b01664

Hagenhoff S, Franzke J, Hayen H.

Determination of Peroxide Explosive TATP and Related Compounds by Dielectric Barrier Discharge Ionization-Mass Spectrometry (DBDI-MS)

Analytical Chemistry, Vol. 89, Nr. 7, 2017, P. 4210–4215

Type: Journal article

DOI: /doi.org/10.1021/acs.analchem.7b00233

Wolf EV, Verhelst SHL.

Activity-based protein profiling

John Wiley and Sons, 2017, P. 305–333

Book series: Chemoselective and bioorthogonal ligation chemistries: concepts and applications

Type: Book contribution

ISBN: 978-3-527-33436-0

Saita S, Nolte H, Fiedler KU, Kashkar H, Venne S, Zahedi RP, Krüger M, Langer T.

PARL mediates Smac proteolytic maturation in mitochondria to promote apoptosis

Nature Cell Biology, Vol. 19, Nr. 4, 2017, P. 318–328

Type: Journal article

DOI: /doi.org/10.1038/ncb3488

Weis J, Claeys KG, Roos A, Azzedine H, Katona I, Schröder JM, Senderek J.

Towards a functional pathology of hereditary neuropathies

Acta Neuropathologica, Vol. 133, Nr. 4, 2017, P. 493–515

Type: Journal article

DOI: /doi.org/10.1007/s00401-016-1645-y

Chandola S, Speiser E, Esser N, Appelfeller S, Franz M, Dähne M.

Optical anisotropy of quasi-1D rare-earth silicide nanostructures on Si(001)

Applied Surface Science, Vol. 399, 2017, P. 648–653

Type: Journal article

DOI: /doi.org/10.1016/j.apsusc.2016.12.044

Salinger T, Hu K, Liu D, Herrmann S, Lorenz K, Ertl G, Nordbeck P.

Cardiac amyloidosis mimicking severe aortic valve stenosis - a case report demonstrating diagnostic pitfalls and role of dobutamine stress echocardiography

BMC Cardiovascular Disorders, Vol. 8, Nr. 7, 2017, P. 11950–11962

Type: Journal article

DOI: /doi.org/10.1186/s12872-017-0519-0

Furchner A, Kroning A, Rauch S, Uhlmann P, Eichhorn KJ, Hinrichs K.

Molecular Interactions and Hydration States of Ultrathin Functional Films at the Solid-Liquid Interface

Analytical Chemistry, Vol. 89, Nr. 6, 2017, P. 3240–3244

Type: Journal article

DOI: /doi.org/10.1021/acs.analchem.7b00208

Lenssen JE, Shpacovitch V, Weichert F.

Real-Time Virus Size Classification Using Surface Plasmon PAMONO Resonance and Convolutional Neural Networks

Springer Heidelberg, Vol. 122, 2017, P. 98–103

Book series: Bildverarbeitung für die Medizin 2017

Type: Book contribution

ISBN: 978-3-662-54344-3

DOI: /doi.org/10.1007/978-3-662-54345-0_26

Rieder V, Blank-Landeshammer B, Stuhr M, Schell T, Biß K, Kollipara L, Meyer A, Pfenninger M, Westphal H, Sickmann A, Rahnenführer J.

DISMS2

BMC Bioinformatics, Vol. 18, Nr. 1, 2017, P. 148

Type: Journal article

DOI: /doi.org/10.1186/s12859-017-1514-2

Wiessner M, Roos A, Munn CJ, Viswanathan R, Whyte T, Cox D, Schoser B, Sewry C, Roper H, Phadke R, Marini Bettolo C, Barresi R, Charlton R, Bönnemann CG, Abath Neto O, Reed UC, Zanoteli E, Araújo Martins Moreno C, Ertl-Wagner B, Stucka R, De Goede C, Borges da Silva T, Hathazi GD, Dell'Aica M, Zahedi RP, Thiele S, Müller J, Kingston H, Müller S, Curtis E, Walter MC, Strom TM, Straub V, Bushby K, Muntoni F, Swan LE, Lochmüller H, Senderek J.

Mutations in INPPSK, Encoding a Phosphoinositide 5-Phosphatase, Cause Congenital Muscular Dystrophy with Cataracts and Mild Cognitive Impairment

American Journal of Human Genetics, Vol. 100, Nr. 3, 2017, P. 523–536

Type: Journal article

DOI: /doi.org/10.1016/j.ajhg.2017.01.024

Gogiashvili M, Telfah A, Lambert J, Hergenröder R.

A flow microslot NMR probe coupled with a capillary isotachophoresis system exhibits improved properties compared to solenoid designs

Analytical and Bioanalytical Chemistry, Vol. 409, Nr. 9, 2017, P. 2471–2475

Type: Journal article

DOI: /doi.org/10.1007/s00216-017-0196-y

Loroch S, Trabold K, Gambaryan S, Reiß C, Schwierczek K, Fleming I, Sickmann A, Behnisch W, Zieger B, Zahedi RP, Walter U, Jurk K.

Alterations of the platelet proteome in type I Glanzmann thrombasthenia caused by different homozygous deIG frameshift mutations in ITGA2B

Thrombosis and Haemostasis, Vol. 117, Nr. 3, 2017, P. 556–569

Type: Journal article

DOI: /doi.org/10.1160/TH16-07-0515

Yu J, Grant OC, Pett C, Strahl S, Woods RJ, Westerlind U.

Induction of Antibodies Directed Against Branched Core O-Mannosyl Glycopeptides-Selectivity Complimentary to the ConA Lectin

Chemistry-A European Journal, Vol. 23, Nr. 14, 2017, P. 3466–3473

Type: Journal article

DOI: /doi.org/10.1002/chem.201605627

Frandrich A, Buller J, Memczak H, Stöcklein W, Hinrichs K, Wischerhoff E, Schulz B, Laschewsky A, Lisdat F.

Responsive Polymer-Electrode Interface-Study of its Thermo- and pH-Sensitivity and the Influence of Peptide Coupling

Electrochimica Acta, Vol. 229, 2017, P. 325–333

Type: Journal article

DOI: /doi.org/10.1016/j.electacta.2017.01.080

van Kersavond T, Nguyen TNM, Verhelst SHL.

Synthesis and application of activity-based probes for proteases

Springer New York, Vol. 1574, 2017, P. 255–266

Book series: Methods in molecular biology

Type: Book contribution

DOI: /doi.org/10.1007/978-1-4939-6850-3_19

Fischer D, Hertwig A, Beck U, Lohse V, Negendank D, Kormunda M, Esser N.

Thin SnOx films for surface lasmon resonance enhanced ellipsometric gas sensing (SPREE)

Beilstein Journal of Nanotechnology, Vol. 8, 2017, P. 522–529

Type: Journal article

DOI: /doi.org/10.3762/bjnano.8.56

Hendgen-Cotta UB, Esfeld S, Coman C, Ahrends R, Klein-Hitpass L, Flögel U, Rassaf T, Totzeck M.

A novel physiological role for cardiac myoglobin in lipid metabolism

Scientific reports, Vol. 7, 2017, P. 43219

Type: Journal article

DOI: /doi.org/10.1038/srep43219

Pott LL, Hagemann S, Reis H, Lorenz K, Bracht T, Herold T, Skryabin BV, Megger DA, Kälsch J, Weber F, Sitek B, Baba HA.

Eukaryotic elongation factor 2 is a prognostic marker and its kinase a potential therapeutic target in HCC

Oncotarget, Vol. 8, Nr. 7, 2017, P. 11950–11962

Type: Journal article

DOI: /doi.org/10.18632/oncotarget.14447

Di Conza G, Trusso Cafarello S, Loroch S, Mennerich D, Deschoemaeker S, Di Matteo M, Ehling M, Gevaert K, Prenen H, Zahedi RP, Sickmann A, Kietzmann T, Moretti F, Mazzone M.

The mTOR and PP2A Pathways Regulate PHD2 Phosphorylation to Fine-Tune HIF1 alpha Levels and Colorectal Cancer Cell Survival under Hypoxia

Cell Reports, Vol. 18, Nr. 7, 2017, P. 1699–1712

Type: Journal article

DOI: /doi.org/10.1016/j.celrep.2017.01.051

Petereit J, Katayama K, Lorenz C, Ewert L, Schertl P, Kitsche A, Wada H, Frentzen M, Braun HP, Eubel H.

Cardiolipin Supports Respiratory Enzymes in Plants in Different Ways

Frontiers in Plant Science, Vol. 8, Nr. 72, 2017, P. 1–14

Type: Journal article

DOI: /doi.org/10.3389/fpls.2017.00072

Shpacovitch V, Sidorenko I, Lenssen JE, Temchura V, Weichert F, Müller H, Überla K, Zybine A, Schramm A, Hergenröder R.

Application of the PAMONO-Sensor for Quantification of Microvesicles and Determination of Nano-Particle Size Distribution

Sensors, Vol. 17, Nr. 2, 2017, P. 244

Type: Journal article

DOI: /doi.org/10.3390/s17020244

Jum'h I, Telfah A, Lambert J, Gogiashvili M, Al-Taani H, Hergenröder R.

C-13 and H-1 NMR measurements to investigate the kinetics and the mechanism of acetic acid (CH3CO2H) ionization as a model for organic acid dissociation dynamics for polymeric membrane water filtration

Journal of Molecular Liquids, Vol. 227, 2017, P. 106–113

Type: Journal article

DOI: /doi.org/10.1016/j.molliq.2016.11.108

Ogada PA, Kiirika LM, Lorenz C, Senkler J, Braun HP, Poehling HM.

Differential proteomics analysis of Frankliniella occidentalis immune response after infection with Tomato spotted wilt virus (Tospovirus)

Developmental and Comparative Immunology, Vol. 67, 2017, P. 1–7

Type: Journal article

DOI: /doi.org/10.1016/j.dci.2016.10.013

Bucur PO, Audebert C, Hammad S, Sebagh M, Allard MA, Decante B, Friebel A, Miquelestorena-Standley E, Drasdo D, Hengstler JG, Vignon-Clementel IE, Vibert E, Hofney Othman A, Bekheit M.

Modulating Portal Hemodynamics With Vascular Ring Allows Efficient Regeneration After Partial Hepatectomy in a Porcine Model

Annals of Surgery, 2017

Type: Journal article

DOI: /doi.org/10.1097/SLA.0000000000002146

Zybin A, Shpacovitch V, Skolnik J, Hergenröder R.

Optimal conditions for SPR-imaging of nano-objects

Sensors and Actuators B - Chemical, Vol. 239, 2017, P. 338–342

Type: Journal article

DOI: /doi.org/10.1016/j.snb.2016.07.124

Brandt S, Klute D, Schütz A, Franzke J.

Dielectric barrier discharges applied for soft ionization and their mechanism

Analytica Chimica Acta, Vol. 951, 2017, P. 16–31

Type: Journal article

DOI: /doi.org/10.1016/j.aca.2016.10.037

Neubert TJ, Rösicke F, Sun G, Janietz S, Gluba MA, Hinrichs K, Nickel NH, Rappich J.

Functionalization of gold and graphene electrodes by p-maleimido-phenyl towards thiol-sensing systems investigated by EQCM and IR ellipsometric spectroscopy (vol 392C, pg 975, 2017)

Applied Surface Science, Vol. 392, 2017, P. 975–975

Type: Journal article

DOI: /doi.org/10.1016/j.apsusc.2017.04.235

Beck F, Geiger J, Gambaryan S, Solari F, Dell'Aica M, Loroch S, Mattheij NJA, Mindukshev I, Pötz O, Jurk K, Burkhart J, Fufezan C, Heemskerk JWM, Walter U, Zahedi RP, Sickmann A.

Temporal quantitative phosphoproteomics of ADP stimulation reveals novel central nodes in platelet activation and inhibition

Blood, Vol. 129, Nr. 2, 2017, P. E1–E12

Type: Journal article

DOI: /doi.org/10.1182/blood-2016-05-714048

Vettel C, Lindner M, Dewenter M, Lorenz K, Schanbacher C, Riedel M, Lämmle S, Meinecke S, Mason FE, Sossalla S, Geerts A, Hoffmann M, Wunder F, Brunner FJ, Wieland T, Mehel H, Karam S, Lechêne P, Leroy J, Vandecasteele G, Wagner M, Fischmeister R, El-Armouche A.

Phosphodiesterase 2 Protects Against Catecholamine-Induced Arrhythmia and Preserves Contractile Function After Myocardial Infarction

Circulation Research, Vol. 120, Nr. 1, 2017, P. 120–132

Type: Journal article

DOI: /doi.org/10.1161/CIRCRESAHA.116.310069

de Oliva Novo PJ, Jender M, Dell'Aica M, Zahedi RP, Janasek D.

Free Flow Electrophoresis Separation of Proteins and DNA Using Microfluidics and Polycarbonate Membranes

Procedia Engineering, Vol. 168, 2017, P. 1382–1385

Type: Journal article

DOI: /doi.org/10.1016/j.proeng.2016.11.385

de Oliva Novo PJ, Dell'Aica M, Janasek D, Zahedi RP.

High Temporal Resolution Study of Phosphorylation Events in HEK Cells Using a Micromixer Microfluidic Device

Procedia Engineering, Vol. 168, 2017, P. 1430–1433

Type: Journal article

DOI: /doi.org/10.1016/j.proeng.2016.11.407

Brauers E, Roos A, Kollipara L, Zahedi RP, Beckmann A, Mohanadas N, Bauer H, Häusler M, Thoma S, Kress W, Senderek J, Weis J.

The Caveolin-3 G56S sequence variant of unknown significance

Proteomics. Clinical applications, Vol. 11, Nr. 1-2, 2017

Type: Journal article

DOI: /doi.org/10.1002/prca.201600007

Mohammed Y, Bhowmick P, Smith DS, Domanski D, Jackson AM, Michaud SA, Malchow S, Percy AJ, Chambers AG, Palmer A, Zhang S, Sickmann A, Borchers CH.

PeptideTracker

Proteomics, Vol. 17, Nr. 7, 2016

Type: Journal article

DOI: /doi.org/10.1002/pmic.201600210

Hofney Othman A, Meyer C, Telfah A, Lambert J, Hergenröder R, Dooley S, Hammad S.

Tamoxifen is critical as inducer of Cre activity in mouse models for hepatotoxicity studies

Zeitschrift für Gastroenterologie, Vol. 54, Nr. 12, 2016, P. 1343–1404

Type: Journal article

DOI: /doi.org/10.1055/s-0036-1597371

Liebhaber M, Halbig B, Bass U, Geurts J, Neufeld S, Sanna S, Schmidt WG, Speiser E, Räthel J, Chandola S, Esser N.

Vibration eigenmodes of the Au-(5 x 2)/Si(111) surface studied by Raman spectroscopy and first-principles calculations

Physical Review B, Vol. 94, Nr. 23, 2016, P. 235304

Type: Journal article

DOI: /doi.org/10.1103/PhysRevB.94.235304

Tinnefeld V, Venne S, Sickmann A, Zahedi RP.

Enrichment of Cross-Linked Peptides Using Charge-Based Fractional Diagonal Chromatography (ChaFRADIC)

Journal of Proteome Research, Vol. 16, Nr. 2, 2016, P. 459–469

Type: Journal article

DOI: /doi.org/10.1021/acs.jproteome.6b00587

Gkogkou D, Shaykhutdinov T, Oates T, Gernert U, Schreiber B, Facsko S, Hildebrandt P, Weidinger IM, Esser N, Hinrichs K.

Characterization of anisotropically shaped silver nanoparticle arrays via spectroscopic ellipsometry supported by numerical optical modeling

Applied Surface Science, Vol. 421, 2016, P. 460–464

Type: Journal article

DOI: /doi.org/10.1016/j.apsusc.2016.10.105

Zahedi RP.

Joining forces - studying multiple post-translational modifications to understand dynamic disease mechanisms

Expert Review of Proteomics, Vol. 13, Nr. 12, 2016, P. 1055–1057

Type: Journal article

DOI: /doi.org/10.1080/14789450.2016.1231577