Publications

Li H, Münchberg U, Oughli AA, Buesen D, Lubitz W, Freier E, Plumeré N.

Suppressing hydrogen peroxide generation to achieve oxygen-insensitivity of a [NiFe] hydrogenase in redox active films

Nature Communications, Vol. 11, Nr. 1, 2020

Type: Journal article

DOI: /doi.org/10.1038/s41467-020-14673-7

Gajdošik Šrajer M, Andjelković U, Gašo-Sokač D, Pavlović H, Shevchuk O, Martinović T, Clifton J, Begić M, Josić D.

Proteomic analysis of pyridoxal oxime derivatives treated Listeria monocytogenes reveals down-regulation of the main virulence factor, Listeriolysin O

Food Research International, Vol. 131, 2020

Type: Journal article

DOI: /doi.org/10.1016/j.foodres.2019.108951

von Bohlen A, Fernández-Ruiz R.

Experimental evidence of matrix effects in total-reflection X-ray fluorescence analysis: Coke case

Talanta, Vol. 209, Nr. 209, 2020

Type: Journal article

DOI: /doi.org/10.1016/j.talanta.2019.120562

Amich J, Mokhtari Z, Strobel M, Vialetto E, Sheta D, Yu Y, Hartweg J, Kalleda N, Jarick KJ, Brede C, Jordán-Garrote AL, Thusek S, Schmiedgen K, Arslan B, Pinnecker J, Thornton CR, Gunzer M, Krappmann S, Einsele H, Heinze KG, Beilhack A.

Three-Dimensional Light Sheet Fluorescence Microscopy of Lungs To Dissect Local Host Immune-Aspergillus fumigatus interactions

mBio, Vol. 11, Nr. 1, 2020, P. e02752–19

Type: Journal article

DOI: /doi.org/10.1128/mBio.02752-19

Knodel A, Marggraf U, Ahlmann N, Brandt S, Foest D, Gilbert López B, Franzke J.

Standardization of Sandwich-Structured Cu–Glass Substrates Embedded in a Flexible Diode Laser–Plasma Interface for the Detection of Cholesterol

Analytical Chemistry, 2020

Type: Journal article

Jender M, Novo P, Mähler D, Münchberg U, Janasek D, Freier E.

Multiplexed Online-Monitoring of Microfluidic Free-Flow Electrophoresis via Mass Spectrometry

ChemRxiv, 2020

Type: Journal article

DOI: /doi.org/10.26434/chemrxiv.11848422.v1

Plaickner J, Speiser E, Chandola S, Esser N, Singh DK.

Adsorption of toluene-3,4-dithiol on silver islands investigated by surface-enhanced Raman spectroscopy

Journal of Raman Spectroscopy, 2020

Type: Journal article

Asheghali D, Lee SJ, Furchner A, Gruzd A, Larson S, Tokarev A, Stake S, Zhou X, Hinrichs K, Zhang LG, Minko S.

Enhanced neuronal differentiation of neural stem cells with mechanically enhanced touch-spun nanofibrous scaffolds

Nanomedicine: Nanotechnology, Biology and Medicine, Vol. 24, 2020

Type: Journal article

DOI: /doi.org/10.1016/j.nano.2020.102152

Vautz W.

Die Ionenmobilitätsspektrometrie – eine immer noch unterschätzte analytische Technik

GIT Labor-Fachzeitschrift, 2020

Type: Journal article

Hoffmann N, Kopczynski D, Al Machot F, Miranda Ackermann J, Sickmann A, Schwudke D, Shevchenko A, Ahrends R.

Lipidomik: wie Lipide die Blutgerinnung steuern

2020

Book series: de.NBI Use Case Broschüre 2020

Type: Book contribution

Furchner A, Kratz C, Ogieglo W, Pinnau I, Rappich J, Hinrichs K.

Ultrasensitive broadband infrared 4 × 4 Mueller-matrix ellipsometry for studies of depolarizing and anisotropic thin films

Journal of Vacuum Science & Technology B, Vol. 38, Nr. 1, 2020, P. 014003

Type: Journal article

DOI: /doi.org/10.1116/1.5129800

Vautz W, Seifert L, Mohammadi M, Klinkenberg I, Liedtke S.

Detection of axillary perspiration metabolites using ion mobility spectrometry coupled to rapid gas-chromatography

Analytical and Bioanalytical Chemistry, 2019, P. 1–10

Type: Journal article

Hinrichs K, Rappich J, Shaykhutdinov T.

Field manipulation of infrared absorption properties in thin films

Physica Status Solidi (b), 2019

Type: Journal article

DOI: /doi.org/10.1002/pssb.201900490

Knorrscheidt A, Püllmann P, Schell E, Homann D, Freier E, Weissenborn M.

Development of 96 Multiple Injection-GC-MS Technique and Its Application in Protein Engineering of Natural and Non-Natural Enzymatic Reactions

ChemRxiv, 2019

Type: Journal article

DOI: /doi.org/10.26434/chemrxiv.10314239.v1

Maimari T, Krasel C, Bünemann M, Lorenz K.

The N-termini of GRK2 and GRK3 simulate the stimulating effects of RKIP on β-adrenoceptors

Biochemical and Biophysical Research Communications, Vol. 520, Nr. 2, 2019, P. 327–332

Type: Journal article

DOI: /doi.org/10.1016/j.bbrc.2019.09.135

Weingärtner O, Lütjohann D, Meyer S, Fuhrmann A, Cremers B, Seiler-Mußler S, Schött HF, Kerksiek A, Friedrichs S, Ulbricht U, Zawada AM, Laufs U, Schulze PC, Scheller B, Fliser D, Böhm M, Sijbrands E, Heine GH.

Low serum lathosterol levels associate with fatal cardiovascular disease and excess all-cause mortality:

Clinical research in Cardiology, Vol. 108, Nr. 12, 2019, P. 1381–1385

Type: Journal article

DOI: /doi.org/10.1007/s00392-019-01474-2

Blank-Landeshammer B, Richard VR, Mitsa G, Marques M, LeBlanc A, Kollipara L, Feldmann I, Couetoux du Tertre M, Gambaro K, McNamara S, Spatz A, Zahedi RP, Sickmann A, Batist G, Borchers C.

Proteogenomics of Colorectal Cancer Liver Metastases

Cancers, Vol. 11, Nr. 12, 2019

Type: Journal article

DOI: /doi.org/10.3390/cancers11121907

Reinders Y, Pohl F, Ahrens N, Prantl L, Kühlmann B, Haubner F.

Impact of platelet-rich plasma on cell migration processes after external radiation.

Clinical Hemorheology and Microcirculation, Vol. 73, Nr. 1, 2019, P. 43–51

Type: Journal article

DOI: /doi.org/10.3233/CH-199218

Wibberg D, Batut B, Belmann P, Blom J, Glöckner FO, Hoffmann N, Grüning B, Kleinbölting N, Rahn R, Rey M, Scholz U, Sharan M, Tauch A, Trojahn U, Usadel B, Kohlbacher O.

The de.NBI / ELIXIR-DE training platform - Bioinformatics training in Germany and across Europe within ELIXIR

F1000 Research, 2019, P. 1877

Type: Journal article

DOI: /doi.org/10.12688/f1000research.20244.1

Hinrichs K, Shaykhutdinov T, Kratz C, Furchner A.

Brilliant mid-infrared ellipsometry and polarimetry of thin films: Toward laboratory applications with laser based techniques

Journal of Vacuum Science & Technology B, Vol. 37, Nr. 37, 060801, 2019, P. 060801

Type: Journal article

DOI: /doi.org/https://avs.scitation.org/doi/10.1116/1.5122869

Greda K, Burhenn S, Pohl P, Franzke J.

Enhancement of emission from indium in flowing liquid anode atmospheric pressure glow discharge using organic media

Talanta, Vol. 2019, Nr. 204, 2019, P. 304–309

Type: Journal article

DOI: /doi.org/10.1016/j.talanta.2019.06.015

Drees C, Vautz W, Liedtke S, Rosin C, Althoff K, Lippmann M, Zimmermann S, Legler T, Yildiz D, Perl T, Kunze-Szikszay N.

GC-IMS headspace analyses allow early recognition of bacterial growth and rapid pathogen differentiation in standard blood cultures

Applied Microbiology and Biotechnology, Vol. 103, Nr. 21-22, 2019, P. 9091–9101

Type: Journal article

DOI: /doi.org/10.1007/s00253-019-10181-x

Vautz W, Hariharan C, Kayser O.

Fast Detection of Recent Cannabis sativa L. Consumption in Exhaled Breath using a Mobile Ion Mobility Spectrometer

Journal for Forensic Research and Crime Science, Vol. 2019, Nr. 3, 2019, P. 1–11

Type: Journal article

DOI: /doi.org/10.17303/jfrcs.2019.3.102

Blank-Landeshammer B, Teichert I, Märker R, Nowrousian M, Kück U, Sickmann A.

Combination of Proteogenomics with Peptide De Novo Sequencing Identifies New Genes and Hidden Posttranscriptional Modifications

mBio, Vol. 10, Nr. 5, 2019

Type: Journal article

DOI: /doi.org/10.1128/mBio.02367-19

Hoffmann N, Hartler J, Ahrends R.

JmzTab-M - A reference parser, writer and validator for the PSI mzTab 2.0 metabolomics standard

Analytical Chemistry, Vol. 91, Nr. 20, 2019, P. 12615–12618

Type: Journal article

DOI: /doi.org/10.1021/acs.analchem.9b01987

Lategahn J, Keul M, Kloevekorn P, Tumbrink HL, Niggenaber J, Mueller MP, Hodson L, Flasshoff M, Hardick J, Grabe T, Engel J, Schultz-Fademrecht C, Baumann M, Ketzer J, Muehlenberg T, Hiller W, Guenther G, Unger A, Mueller H, Heimsoeth A, Golz C, Blank-Landeshammer B, Kollipara L, Zahedi RP, Strohmann C, Hengstler JG, van Otterlo WAL, Bauer S, Rauh D.

Inhibition of osimertinib-resistant epidermal growth factor receptor EGFR-T790M/C797S

Chemical Science, Vol. 10, Nr. 46, 2019, P. 10789–10801

Type: Journal article

DOI: /doi.org/10.1039/c9sc03445e

Jochmann S, Elkenani M, Mohamed BA, Buchholz E, Lbik D, Binder L, Lorenz K, Shah AM, Hasenfuß G, Toischer K, Schnelle M.

Assessing the role of extracellular signal-regulated kinases 1 and 2 in volume overload-induced cardiac remodelling

ESC heart failure, Vol. 6, Nr. 5, 2019, P. 1015–1026

Type: Journal article

DOI: /doi.org/10.1002/ehf2.12497

Furchner A, Kratz C, Rappich J, Hinrichs K.

Hyperspectral Infrared Laser Polarimetry for Single-Shot Phase–Amplitude Imaging of Thin Films

Optics Letters, Vol. 44, Nr. 19, 2019, P. 4893–4896

Type: Journal article

DOI: /doi.org/10.1364/OL.44.004893

Stanstrup J, Broeckling CD, Helmus R, Hoffmann N, Mathé E, Naake T, Nicolotti L, Peters K, Rainer J, Salek R, Schulze T, Schymanski E, Stravs MA, Thevenot E, Treutler H, Weber RJM, Willighagen E, Witting M, Neumann S.

The metaRbolomics toolbox in Bioconductor and beyond

Metabolites, Vol. 9, Nr. 10, 2019

Type: Journal article

DOI: /doi.org/10.3390/metabo9100200

Yayla M, Toma A, Chen KH, Lenssen JE, Shpacovitch V, Hergenröder R, Weichert F, Chen JJ.

Nanoparticle Classification Using Frequency Domain Analysis on Resource-Limited Platforms

Sensors, Vol. 19, Nr. 19, 2019

Type: Journal article

DOI: /doi.org/10.3390/s19194138

Maximchik P, Tamarov K, Sheval E, Tolstik E, Kirchberger-Tolstik T, Yang Z, Sivakov V, Zhivotovsky B, Osminkina LA.

Biodegradable Porous Silicon Nanocontainers as an Effective Drug Carrier for Regulation of the Tumor Cell Death Pathways

Acs biomaterials science & engineering, Vol. 5, Nr. 11, 2019, P. 6063–6071

Type: Journal article

DOI: /doi.org/10.1021/acsbiomaterials.9b01292

Gkogkou D, Shaykhutdinov T, Kratz C, Oates T, Hildebrandt P, Weidinger IM, Khoa Ly H, Esser N, Hinrichs K.

Gradient metal nanoislands as a unified surface enhanced Raman scattering and surface enhanced infrared absorption platform for analytics

Analyst, Vol. 144, Nr. 17, 2019, P. 5271–5276

Type: Journal article

DOI: /doi.org/10.1039/c9an00839j

Burhenn S, Kratzer J, Dědina J, Franzke J.

Influences of voltage shape and discharge gas on the temporally andspatially resolved emission characteristics of tin in a planar dielectric barrierdischarge

Spectrochimica Acta Part B-Atomic Spectroscopy, Vol. 2019, Nr. 161, 2019

Type: Journal article

Jafar MMA, Saleh MH, Al‑Daraghmeh TM, Ahmad MJA, AbuEid MA, Ershaidat NM, Bulos BN.

Structural, stoichiometric and optical constants of crystalline undoped lead iodide films prepared by the flash‑evaporation method

Applied Physics A - Materials Science & Processing, Vol. 125, Nr. 10, 2019

Type: Journal article

DOI: /doi.org/10.1007/s00339-019-2945-6

Furchner A, Kratz C, Hinrichs K.

Sub-second infrared broadband-laser single-shot phase-amplitude polarimetry of thin films

Optics Letters, Vol. 44, Nr. 17, 2019, P. 4387–4390

Type: Journal article

DOI: /doi.org/10.1364/OL.44.004387

Hänisch J, Hinrichs K, Rappich J.

Surface Functionalization toward Biosensing via Free-Standing Si-OH Bonds on Nonoxidized Silicon Surfaces

ACS Applied Materials & Interfaces, Vol. 11, Nr. 34, 2019, P. 31434–31440

Type: Journal article

DOI: /doi.org/10.1021/acsami.9b03583

Nadja M, Pyle A, Hathazi D, Alston CL, Kohlschmidt N, Gina O, Leigh W, Frances E, Cooper SBT, Christian T, Duff J, Topf A, Delia Y, Cristina J, Andrés N, Carlos O, Angels GC, Claudia G, Mar O, Saikat S, Preece MA, Michael C, Sergei K, Efsthatia C, Majumdar A, Germaine P, Daniel M, Kyle T, Placido N, Antonia R, Frederic T, Agatha S, Aurora P, Raquel M, Georgia S, Lochmüller H, Cecilia JM, Taylor RW, Rafael A, Kirschner J, Grünert SC, Roos A, Horvath R.

Clinical presentation and proteomic signature of patients with TANGO2 mutations

Journal of Inherited Metabolic Disease, Vol. 2019, Nr. 42, 2019, P. 1–12

Type: Journal article

DOI: /doi.org/10.1002/jimd.12156

Kronlage M, Dewenter M, Grosso J, Fleming T, Oehl UY, Lehmann LH, Falcão-Pires I, Leite-Moreira AF, Volk N, Gröne HJ, Müller OJ, Sickmann A, Katus HA, Backs J.

O-GlcNAcylation of Histone Deacetylase 4 Protects the Diabetic Heart from Failure

Circulation, Nr. 7, 2019, P. 580–594

Type: Journal article

DOI: /doi.org/10.1161/CIRCULATIONAHA.117.031942

Juhászová L, Burhenn S, Sagapova L, Franzke J, Dedina J, Kratzer J.

Hydride generation atomic absorption spectrometry with a dielectric barrier discharge atomizer

Spectrochimica Acta Part B-Atomic Spectroscopy, Vol. 2019, Nr. 158, 2019

Type: Journal article

DOI: /doi.org/10.1016/j.sab.2019.05.019

Kappler L, Hoene M, Hu C, von Toerne C, Li J, Bleher D, Hoffmann C, Böhm A, Kollipara L, Zischka H, Königsrainer A, Häring HU, Peter A, Xu G, Sickmann A, Hauck SM, Weigert C, Lehmann R.

Linking bioenergetic function of mitochondria to tissue-specific molecular fingerprints

American Journal of Physiology-Endocrinology and Metabolism, Vol. 317, Nr. 2, 2019, P. E374–E387

Type: Journal article

DOI: /doi.org/10.1152/ajpendo.00088.2019

Liebisch G, Ahrends R, Arita M, Bowden JA, Ejsing CS, Griffiths WJ, Holčapek M, Köfeler H, Mitchell TW, R. Wenk M, Ekros K.

Lipidomics needs more standardization

Nature Metabolism, Vol. 1, Nr. 8, 2019, P. 745–747

Type: Journal article

DOI: /doi.org/10.1038/s42255-019-0094-z

Wirthschaft P, Bode J, Soni H, Dietrich F, Krüwel T, Fischer B, Knobbe-Thomsen CB, Rossetti G, Hentschel A, Mack N, Schönig K, Breckwoldt MO, Schmandke A, Pusch S, Medenbach J, Bendszus M, Schwab ME, Deimling AV, Kool M, Herold-Mende C, Reifenberger G, Ahrends R, Tews B.

RhoA regulates translation of the Nogo-A decoy SPARC in white matter-invading glioblastomas

Acta Neuropathologica, Vol. 138, Nr. 2, 2019, P. 275–293

Type: Journal article

DOI: /doi.org/10.1007/s00401-019-02021-z

Boutouja F, Stiehm CM, Mastalski T, Brinkmeier R, Reidick C, El Magraoui F, Platta HW.

Vps10-mediated targeting of Pep4 determines the activity of the vacuole in a substrate-dependent manner

Scientific reports, Vol. 9, Nr. 1, 2019

Type: Journal article

DOI: /doi.org/10.1038/s41598-019-47184-7

Gilbert López B, Lara-Ortega FJ, Robles-Molina J, Brandt S, Schütz A, Moreno-González D, García-Reyes JF, Molina-Díaz A, Franzke J.

Detection of multiclass explosives and related compounds in soil and water by liquid chromatography-dielectric barrier discharge ionization-mass spectrometry

Analytical and Bioanalytical Chemistry, Vol. 411, Nr. 19, 2019, P. 4785–4796

Type: Journal article

DOI: /doi.org/10.1007/s00216-019-01627-2

Rodziewicz P, Loroch S, Marczak �, Sickmann A, Kayser O.

Cannabinoid synthases and osmoprotective metabolites accumulate in the exudates of Cannabis sativa L. glandular trichomes

Plant Science, Vol. 284, 2019, P. 108–116

Type: Journal article

DOI: /doi.org/10.1016/j.plantsci.2019.04.008

Hogan C, Suchkova S, Bechstedt F, Speiser E, Chandola S, Esser N.

Organic Molecule Adsorption on Stepped Si-Au Surfaces: Role of Functional Group on Geometry and Electronic Structure

Physica Status Solidi (b), Vol. 256, Nr. 7, 2019

Type: Journal article

DOI: /doi.org/10.1002/pssb.201800653

Boutouja F, Stiehm CM, Reidick C, Mastalski T, Brinkmeier R, Magraoui FE, Platta HW.

Vac8 Controls Vacuolar Membrane Dynamics during Different Autophagy Pathways in Saccharomyces cerevisiae

Cells, Vol. 2019, Nr. 7, 2019

Type: Journal article

DOI: /doi.org/10.3390/cells8070661

Nguyen DLC, Malchow S, Reich S, Steltgens S, Shuvaev K, Loroch S, Lorenz C, Sickmann A, Knobbe-Thomsen CB, Tews B, Medenbach J, Ahrends R.

A sensitive and simple targeted proteomics approach to quantify transcription factor and membrane proteins of the unfolded protein response pathway in glioblastoma cells

Scientific reports, Vol. 9, 2019

Type: Journal article

DOI: /doi.org/10.1038/s41598-019-45237-5

Gatz C, Hathazi D, Münchberg U, Buchkremer S, Labisch T, Munro B, Horvath R, Töpf A, Weis J, Roos A.

Identification of Cellular Pathogenicity Markers for SIL1 Mutations Linked to Marinesco-Sjogren Syndrome

Frontiers in neurology, Vol. 2019, Nr. 10, 2019, P. 1–15

Type: Journal article

DOI: /doi.org/10.3389/fneur.2019.00562

Tan Q, Hinrichs K, Huang MD, Fengler S, Rappich J, Prajongtat P, Nickel NH, Dittrich T.

Temperature dependent diffusion of DMSO in CH3NH3PbI3 precursor films during layer formation and impact on solar cells

ACS Applied Energy Materials, Vol. 2019, Nr. 27, 2019, P. 5116

Type: Journal article