Publications

Mailer RK, Allende M, Heestermans M, Schweizer M, Deppermann C, Frye M, Pula G, Odeberg J, Gelderblom MP, Rose-John S, Sickmann A, Blankenberg S, Huber TB, Kubisch C, Maas C, Gambaryan S, Firsov D, Stavrou EX, Butler L, Renné T.

Xenotropic and polytropic retrovirus receptor 1 regulates procoagulant platelet polyphosphate

Blood, 2020

Type: Journal article

DOI: /doi.org/10.1182/blood.2019004617

Jarmusch SA, Feldmann I, Blank-Landeshammer B, Cortés-Albayay C, Castro JF, Andrews B, Asenjo JA, Sickmann A, Ebel R, Jaspars M.

Cutting the Gordian knot: early and complete amino acid sequence confirmation of class II lasso peptides by HCD fragmentation

The Journal of antibiotics, 2020

Type: Journal article

DOI: /doi.org/10.1038/s41429-020-00369-z

Petereit J, Duncan O, Murcha MW, Fenske R, Cincu E, Cahn J, Pruzinska A, Ivanova A, Kollipara L, Wortelkamp S, Sickmann A, Lee J, Lister R, Millar AH, Huang S.

Mitochondrial CLPP2 assists coordination and homeostasis of respiratory complexes

Plant Physiology, Vol. 2020, Nr. 184, 2020, P. 148–164

Type: Journal article

DOI: /doi.org/10.1104/pp.20.00136

Kopczynski D, Hentschel A, Coman C, Schebb NH, Hornemann T, Mashek D, Hartung NM, Shevchuk O, Schött HF, Lorenz K, Torta F, Burla B, Zahedi RP, Sickmann A, Kreutz MR, Ejsing C, Medenbach J, Ahrends R.

Simple targeted assays for metabolic pathways and signaling: a powerful tool for targeted proteomics

Analytical Chemistry, Vol. 2020, 2020

Type: Journal article

DOI: /doi.org/10.1021/acs.analchem.0c02793

Drees C, Schütz A, Niu G, Franzke J, Vautz W, Brandt S.

Stepwise optimization of a Flexible Microtube Plasma (FµTP) as an ionization source for Ion Mobility Spectrometry

Analytica Chimica Acta, Vol. 1127, 2020, P. 89–97

Type: Journal article

DOI: /doi.org/10.1016/j.aca.2020.06.018

Kopczynski D, Hoffmann N, Peng B, Ahrends R.

Goslin - A Grammar of Succinct Lipid Nomenclature

Analytical Chemistry, Vol. 92, Nr. 16, 2020, P. 10957–10960

Type: Journal article

DOI: /doi.org/10.1021/acs.analchem.0c01690

Kasabri V, Arabiyat S, Al-Hiari Y, Zalloum H, Almaliti J, Telfah A, Bustanji YK, Alalawi S.

Fluoroquinolones as a potentially novel class of antidiabesity and antiproliferative compounds: synthesis and docking studies

Canadian Journal of Chemistry, Vol. 1, 2020, P. 1–11

Type: Journal article

DOI: /doi.org/10.1139/cjc-2020-0162

Sunoqrot S, Mahmound NN, Ibrahim LH, Al-Dabash S, Raschke H, Hergenröder R.

Tuning the Surface Chemistry of Melanin-Mimetic Polydopamine Nanoparticles Drastically Enhances Their Accumulation into Excised Human Skin

ACS Biomaterials Science & Engineering, Vol. 6, Nr. 8, 2020, P. 4424–4432

Type: Journal article

DOI: /doi.org/10.1021/acsbiomaterials.0c00196

Ebersbach P, Münchberg U, Freier E.

SERS background imaging – A versatile tool towards more reliable SERS analytics

Research Square, 2020

Type: Journal article

DOI: /doi.org/10.21203/rs.3.rs-41355/v1

Sims MC, Mayer L, Collins J, Bariana T, Megy K, Lavenu-Bombled C, Seyres D, Kollipara L, Burden F, Greene D, Lee D, Rodriguez-Romera A, Alessi MC, Astle WJ, Bahou W, Bury L, Chalmers E, Da Silva R, De Candia E, Deevi SVV, Farrow S, Gomez K, Grassi L, Greinacher A, Gresele P, Hart DP, Hurtaud MF, Kelly A, Kerr R, Le Quellec S, Leblanc TM, Leinøe EB, Mapeta RP, McKinney H, Michelson AD, Morais S, Nugent DJ, Papadia S, Park SJ, Pasi J, Podda GM, Poon MC, Reed R, Sekhar M, Shalev H, Sivapalaratnam S, Steinberg-Shemer O, Stephens JC, Tait RC, Turro E, Wu JK, Zieger BMH, Kuijpers TW, Whetton AD, Sickmann A, Freson K, Downes K, Erber W, Frontini M, Nurden P, Ouwehand WH, Favier R, Guerrero JA.

Novel manifestations of immune dysregulation and granule defects in gray platelet syndrome

Blood, 2020

Type: Journal article

DOI: /doi.org/10.1182/blood.2019004776

Vogel P, Lazarou C, Gazeli O, Brandt S, Franzke J, Moreno-González D.

Study of Controlled Atmosphere Flexible Microtube Plasma Soft Ionization Mass Spectrometry for Detection of Volatile Organic Compounds as Potential Biomarkers in Saliva for Cancer

Analytical Chemistry, Vol. 92, Nr. 14, 2020, P. 9722–9729

Type: Journal article

DOI: /doi.org/10.1021/acs.analchem.0c01063

Bornemann L, Schuster M, Schmitz S, Sobczak C, Bessen C, Merz SF, Jöckel KH, Haverkamp T, Gunzer M, Göthert JR.

Defective migration and dysmorphology of neutrophil granulocytes in atypical chronic myeloid leukemia treated with ruxolitinib

BMC cancer, Vol. 20, Nr. 1, 2020, P. 650

Type: Journal article

DOI: /doi.org/10.1186/s12885-020-07130-7

Hinrichs K, Kratz C, Furchner A.

Hyperspectral mid-infrared ellipsometric measurements in the twinkling of an eye

Spectroscopy Asia, Vol. 16, Nr. 2, 2020, P. 8–12

Type: Journal article

DOI: /doi.org/https://www.spectroscopyasia.com/content/volume-16-issue-2-2020

Furchner A, Kratz C, Hinrichs K.

Laser IR ellipsometry for surface analytics - Hyperspectral and microfluidic applications

2020

Book series: Laser IR ellipsometry for surface analytics

Type: Book contribution

DOI: /doi.org/https://analyticalscience.wiley.com/do/10.1002/was.00080139

Koelbel H, Roos A, van der Ven PFM, Evangelista T, Nolte K, Johnson K, Töpf A, Wilson M, Kress W, Sickmann A, Straub V, Kollipara L, Weis J, Fürst DO, Schara U.

First Clinical and Myopathological Description of a Myofibrillar Myopathy with Congenital Onset and Homozygous Mutation in FLNC

Human mutation, Vol. 41, Nr. 9, 2020, P. 1600–1614

Type: Journal article

DOI: /doi.org/10.1002/humu.24062

Hack T, Bertram S, Blair H, Borger V, Busche G, Denson L, Fruth E, Giebel B, Heidenreich O, Klein-Hitpass L, Kollipara L, Sendker S, Sickmann A, Walter C, von Neuhoff N, Hanenberg H, Reinhardt D, Schneider M, Rasche M.

Exposure of patient-derived mesenchymal stromal cells to TGFB1 supports fibrosis induction in a pediatric acute megakaryoblastic leukemia model

Molecular Cancer Research, 2020, P. molcanres.0091.2020

Type: Journal article

DOI: /doi.org/10.1158/1541-7786.MCR-20-0091

Ebersbach P, Münchberg U, Freier E.

SERS Background Imaging – a Versatile Tool Towards More Reliable SERS Analytics

ChemRxiv, 2020

Type: Journal article

DOI: /doi.org/10.26434/chemrxiv.12589013

Jeanclos E, Knobloch G, Hoffmann A, Fedorchenko O, Odersky A, Lamprecht AK, Schindelin H, Gohla A.

Ca2+ functions as a molecular switch that controls the mutually exclusive complex formation of pyridoxal phosphatase with CIB1 or Calmodulin

FEBS Letters, Vol. 594, Nr. 13, 2020, P. 2099–2115

Type: Journal article

DOI: /doi.org/10.1002/1873-3468.13795

Hentschel A, Czech AA, Münchberg U, Freier E, Schara-Schmidt U, Sickmann A, Reimann J, Roos A.

Protein Signature of Human Skin Fibroblasts Allows the Study of the Molecular Etiology of Rare Neurological Diseases

Research Square, 2020

Type: Journal article

DOI: /doi.org/10.21203/rs.3.rs-48014/v1

Kratz C, Furchner A, Sun G, Rappich J, Hinrichs K.

Sensing and structure analysis by in situ IR spectroscopy: From mL flow cells to microfluidic applications

Journal of Physics - Condensed Matter, Vol. 32, Nr. 39, 2020

Type: Journal article

DOI: /doi.org/https://iopscience.iop.org/article/10.1088/1361-648X/ab8523

Mokhtari DJ, Jum'h I, Baaziz H, Charifi Z, Ghellab T, Telfah A, Hergenröder R.

Structural, electronic, magnetic and thermoelectric properties of inverse Heusler alloys Ti2CoSi, Mn2CoAl and Cr2ZnSi by employing Ab initio calculations

Philosophical magazine, Vol. 100, Nr. 12, 2020, P. 1636–1661

Type: Journal article

DOI: /doi.org/10.1080/14786435.2020.1731926

Alsaad AM, Al‑Bataineh QM, Telfah M, Ahmad AA, Albataineh Z, Telfah A.

Optical properties and photo‑isomerization processes of PMMA–BDK–MR nanocomposite thin films doped by silica nanoparticles

Polymer Bulletin, Vol. 2020, 2020

Type: Journal article

DOI: /doi.org/10.1007/s00289-020-03273-6

Al-Bataineh QM, Alsaad AM, Ahmad AA, Telfah A.

A novel optical model of the experimental transmission spectra of nanocomposite PVC-PS hybrid thin films doped with silica nanoparticles

Heliyon, Vol. 2020, Nr. 6, 2020, P. e04177

Type: Journal article

DOI: /doi.org/10.1016/j.heliyon.2020.e04177

Strandberg K, Ayoglu B, Roos A, Reza M, Niks EH, Signorelli M, Fasterius E, Pontén F, Lochmüller H, Domingos J, Pierpaolo A, Muntoni F, Aartsma-Rus A, Spitali P, Nilsson P, Al-Khalili-Szigyarto C.

Blood-derived biomarkers correlate with clinical progression in Duchenne muscular dystrophy

Journal of Neuromuscular Diseases, Vol. 2020, 2020, P. 231–246

Type: Journal article

DOI: /doi.org/10.3233/JND-190454

Scheller I, Stritt S, Beck S, Peng B, Pleines I, Heinze KG, Braun A, Otto O, Ahrends R, Sickmann A, Bender M, Nieswandt B.

Coactosin-like 1 integrates signaling critical for shear-dependent thrombus formation in mouse platelets

Haematologica, Vol. 105, Nr. 6, 2020, P. 1667–1676

Type: Journal article

DOI: /doi.org/10.3324/haematol.2019.225516

Hentschel A, Ahrends R.

Developing a Robust Assay to Monitor and Quantify Key Players of Metabolic Pathways during Adipogenesis by Targeted Proteomics

Proteomics, Vol. 20, Nr. 11, 2020

Type: Journal article

DOI: /doi.org/10.1002/pmic.201900141

Alsaad AM, Al-Bataineh QM, Ahmad AA, Albataineh Z, Telfah A.

Optical band gap and refractive index dispersion parameters of boron-doped ZnO thin films: A novel derived mathematical model from the experimental transmission spectra

Optik, Vol. 2020, Nr. 211, 2020, P. 164641–164654

Type: Journal article

DOI: /doi.org/10.1016/j.ijleo.2020.164641

AlKhalil M, Al-Hiari Y, Kasabri V, Arabiyat S, Al-Zweiri M, Mamdooh N, Telfah A.

Selected pharmacotherapy agents as antiproliferative and anti‐inflammatory compounds

Drug Development Research, Vol. 2020, Nr. 81, 2020, P. 470–490

Type: Journal article

DOI: /doi.org/10.1002/ddr.21640

Shpacovitch V, Hergenröder R.

Surface Plasmon Resonance (SPR)-Based Biosensors as Instruments with High Versatility and Sensitivity

Sensors, Vol. 20, Nr. 11, 2020

Type: Journal article

DOI: /doi.org/10.3390/s20113010

Knorrscheidt A, Püllmann P, Schell E, Homann D, Freier E, Weissenborn MJ.

Identification of novel unspecific peroxygenase chimeras and unusual YfeX axial heme ligand by a versatile high-throughput GC-MS approach

ChemCatChem, Vol. n/a, Nr. n/a, 2020

Type: Journal article

DOI: /doi.org/10.1002/cctc.202000618

Metzger P, Kirchleitner SV, Boehmer DFR, Hörth C, Eisele A, Ormanns S, Gunzer M, Lech M, Lauber K, Endres S, Duewell P, Schnurr M, König LM.

Systemic but not MDSC-specific IRF4 deficiency promotes an immunosuppressed tumor microenvironment in a murine pancreatic cancer model

Cancer Immunology, Immunotherapy, 2020

Type: Journal article

DOI: /doi.org/10.1007/s00262-020-02605-9

Künzel SR, Rausch JSE, Schäffer C, Hoffmann M, Künzel K, Klapproth E, Kant T, Herzog N, Dudek S, Küpper JH, Lorenz K, Emig R, Ravens U, Rog-Zielinska EA, Peyronnet R, El-Armouche A.

Modeling atrial fibrosis in vitro - Generation and characterization of a novel human atrial fibroblast cell line

FEBS open bio, 2020

Type: Journal article

DOI: /doi.org/10.1002/2211-5463.12896

Hinrichs K, Rappich J, Shaykhutdinov T.

Cover Picture: Field Manipulation of Infrared Absorption Properties

Physica Status Solidi B-Basic Solid State Physics, Vol. 2020, Nr. 257, 2070022, 2020

Type: Journal article

DOI: /doi.org/10.1002/pssb.202070022

Hinrichs K, Rappich J, Shaykhutdinov T.

Field manipulation of infrared absorption properties in thin films

Physica Status Solidi (b), Vol. 5, Nr. 257, 2020

Type: Journal article

DOI: /doi.org/10.1002/pssb.201900490

Alsaad AM, Al-Bataineh QM, Qattan IA, Ahmad AA, Ababneh A, Albataineh Z, Aljarrah IA, Telfah A.

Measurement and ab initio Investigation of Structural, Electronic, Optical, and Mechanical Properties of Sputtered Aluminum Nitride Thin Films

Frontiers in Physics, Vol. 2020, Nr. 115, 2020

Type: Journal article

DOI: /doi.org/10.3389/fphy.2020.00115

Gonzalez-Beltran AN, Masuzzo P, Ampe C, Bakker GJ, Besson S, Eibl RH, Friedl P, Gunzer M, Kittisopikul M, Dévédec SEL, Leo S, Moore J, Paran Y, Prilusky J, Rocca-Serra P, Besson, S, Roudot P, Schuster M, Sergeant G, Strömblad S, Swedlow JR, van Erp M, Van Troys M, Zaritsky A, Sansone SA, Martens L.

Community standards for open cell migration data

GigaScience, Vol. 9, Nr. 5, 2020

Type: Journal article

DOI: /doi.org/10.1093/gigascience/giaa041

Gajdošik Šrajer M, Andjelković U, Gašo-Sokač D, Pavlović H, Shevchuk O, Martinović T, Clifton J, Begić M, Josić D.

Proteomic analysis of pyridoxal oxime derivatives treated Listeria monocytogenes reveals down-regulation of the main virulence factor, Listeriolysin O

Food Research International, Vol. 131, 2020

Type: Journal article

DOI: /doi.org/10.1016/j.foodres.2019.108951

Peng B, Kopczynski D, Pratt B, Ejsing C, Burla B, Hermansson M, Benke PI, Tan SH, Chan MY, Torta F, Schwudke D, Meckelmann S, Coman C, Schmitz O, MacLean B, Manke M, Borst O, R. Wenk M, Hoffmann N, Ahrends R.

LipidCreator: A workbench to probe the lipidomic landscape

Nature Communications, Vol. 11, Nr. 1, 2020, P. 2057

Type: Journal article

DOI: /doi.org/10.1038/s41467-020-15960-z

Jender M, Novo P, Mähler D, Münchberg U, Janasek D, Freier E.

Multiplexed Online-Monitoring of Microfluidic Free-Flow Electrophoresis via Mass Spectrometry

Analytical Chemistry, Vol. 92, Nr. 9, 2020, P. 6764–6769

Type: Journal article

DOI: /doi.org/10.1021/acs.analchem.0c00996

Kopczynski D, Hoffmann N, Peng B, Ahrends R.

Goslin - A Grammar of Succinct Lipid Nomenclature

Cold Spring Harbor Laboratory Press, 2020

Book series: BioRxiv

Type: Book contribution

DOI: /doi.org/10.1101/2020.04.17.046656

Hinrichs K, Kratz C, Furchner A.

Hyperspectral mid-infrared ellipsometric measurements in the twinkling of an eye

Spectroscopy Europe, Vol. 2020, Nr. 32 (2), 2020, P. 10–14

Type: Journal article

DOI: /doi.org/https://www.spectroscopyeurope.com/article/hyperspectral-mid-infrared-ellipsometric-measurements-twinkling-eye

Tomasovic A, Brand T, Schanbacher C, Kramer S, Hümmert MW, Godoy P, Schmidt-Heck W, Nordbeck P, Ludwig J, Homann S, Wiegering A, Shaykhutdinov T, Kratz C, Knüchel R, Müller-Hermelink HK, Rosenwald A, Frey N, Eichler J, Dobrev D, El-Armouche A, Hengstler JG, Müller OJ, Hinrichs K, Cuello F, Zernecke A, Lorenz K.

Interference with ERK-dimerization at the nucleocytosolic interface targets pathological ERK1/2 signaling without cardiotoxic side-effects

Nature Communications, Vol. 11, Nr. 1, 2020

Type: Journal article

DOI: /doi.org/10.1038/s41467-020-15505-4

Braun C, Neufeld , Gerstmann U, Sanna S, Plaickner J, Speiser E, Esser N, Schmidt WG.

Vibration Driven Self-Doping of Dangling-Bond Wires on Si(553)-Au Surfaces

Physical Review Letters, Vol. 2020, Nr. 124, 2020

Type: Journal article

DOI: /doi.org/10.1103/PhysRevLett.124.146802

Makepeace K, Mohammed Y, Rudashevskaya E, Petrotchenko E, Vögtle FN, Meisinger C, Sickmann A, Borchers C.

Improving Identification of In-organello Protein-Protein Interactions Using an Affinity-enrichable, Isotopically Coded, and Mass Spectrometry-cleavable Chemical Crosslinker

Molecular & Cellular Proteomics, Vol. 19, Nr. 4, 2020, P. 624–639

Type: Journal article

DOI: /doi.org/10.1074/mcp.RA119.001839

Duscha A, Gisevius B, Hirschberg S, Yissachar N, Stangl GI, Eilers E, Bader V, Haase S, Kaisler J, David C, Schneider R, Troisi R, Zent D, Hegelmaier T, Dokalis N, Gerstein S, Del Mare-Roumani S, Amidror S, Staszewski O, Poschmann G, Stühler K, Hirche F, Balogh A, Kempa S, Träger P, Zaiss MM, Holm JB, Massa MG, Nielsen HB, Faissner A, Lukas C, Gatermann SG, Scholz M, Przuntek H, Prinz M, Forslund SK, Winklhofer KF, Müller DN, Linker RA, Haghikia A.

Propionic Acid Shapes the Multiple Sclerosis Disease Course by an Immunomodulatory Mechanism

Cell, 2020, P. 1067–1080.e16

Type: Journal article

DOI: /doi.org/10.1016/j.cell.2020.02.035

von Bohlen A, Fernández-Ruiz R.

Experimental evidence of matrix effects in total-reflection X-ray fluorescence analysis: Coke case

Talanta, Vol. 209, Nr. 209, 2020

Type: Journal article

DOI: /doi.org/10.1016/j.talanta.2019.120562

Töpf A, Oktay Y, Balaraju S, Yilmaz E, Sonmezler E, Yis U, Laurie S, Thompson R, Roos A, MacArthur DG, Yaramis A, Gungor S, Lochmüller H, Hiz S, Horvath R.

Severe neurodevelopmental disease caused by a homozygous TLK2 variant

European journal of human genetics, Vol. 28, Nr. 3, 2020, P. 383–387

Type: Journal article

DOI: /doi.org/10.1038/s41431-019-0519-x

Plaickner J, Esser N, Halbig B, Geurts J, Schmidt WG, Sanna S.

Vibrational Raman spectroscopy on adsorbate-induced low-dimensional surface structures

Surface Science Reports, Vol. 75, Nr. 1, 2020

Type: Journal article

DOI: /doi.org/10.1016/j.surfrep.2020.100480

Camparini L, Kollipara L, Sinagra G, Loffredo FS, Sickmann A, Shevchuk O.

Targeted Approach to Distinguish and Determine Absolute Levels of GDF8 and GDF11 in Mouse Serum

Proteomics, 2020, P. e1900104

Type: Journal article

DOI: /doi.org/10.1002/pmic.201900104

Amich J, Mokhtari Z, Strobel M, Vialetto E, Sheta D, Yu Y, Hartweg J, Kalleda N, Jarick KJ, Brede C, Jordán-Garrote AL, Thusek S, Schmiedgen K, Arslan B, Pinnecker J, Thornton CR, Gunzer M, Krappmann S, Einsele H, Heinze KG, Beilhack A.

Three-Dimensional Light Sheet Fluorescence Microscopy of Lungs To Dissect Local Host Immune-Aspergillus fumigatus interactions

mBio, Vol. 11, Nr. 1, 2020, P. e02752–19

Type: Journal article

DOI: /doi.org/10.1128/mBio.02752-19